Miyakogusa Predicted Gene

Lj0g3v0273429.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273429.1 tr|Q00RM0|Q00RM0_ORYSA H0814G11.20 protein
OS=Oryza sativa GN=H0814G11.20 PE=4
SV=1,37.5,3e-19,DUF740,Uncharacterised protein family
UPF0503,CUFF.18105.1
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11870.1                                                       228   4e-60
Glyma04g42890.1                                                       208   4e-54
Glyma13g03290.1                                                       171   6e-43
Glyma14g23730.1                                                       104   7e-23

>Glyma06g11870.1 
          Length = 203

 Score =  228 bits (581), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/217 (61%), Positives = 153/217 (70%), Gaps = 30/217 (13%)

Query: 1   MNNRSGFREEKPCCYFHPKQVVVGVCPLCLNERLLIVAATQGQHSKNR---SSKASNKVQ 57
           MN R+G+RE+K  C FHPKQV++GVCPLCLNERLLI+AA QG H +NR   SSK+S+++Q
Sbjct: 3   MNIRNGYREDKSFCCFHPKQVLIGVCPLCLNERLLILAAKQGHHHQNRSSSSSKSSHRLQ 62

Query: 58  -SSVHTKPASSIHKIFAFGSLFSRQEWKSDNFDCDVTSPSPEDSFISIKFEE-------- 108
            SS H KP SSIHKIFAFGSLF+R E   +N+D D  SPSPE+SFISIKFEE        
Sbjct: 63  VSSRHRKPPSSIHKIFAFGSLFTRPESHHNNYDYDDVSPSPEESFISIKFEENGVASWEK 122

Query: 109 STVSNKVSLENCNNKMSWNHHQNNKGTTTTIKSVIEHGKSRDAFRWRKRIGHMFQLIRWK 168
           STVS KVS        SWNH   +       KSVIEHGKSRD FRWRKRIGHM QLIRWK
Sbjct: 123 STVSKKVS--------SWNHQNKDNN-----KSVIEHGKSRDTFRWRKRIGHMLQLIRWK 169

Query: 169 K--GTCHVSSNTSKVEGVKVRKGWMMRTLTKRKKTME 203
           K  G CHV    +KVEGVKVRKGWM     ++  TME
Sbjct: 170 KSGGVCHVG---TKVEGVKVRKGWMRTLTKRKTTTME 203


>Glyma04g42890.1 
          Length = 200

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/206 (63%), Positives = 147/206 (71%), Gaps = 33/206 (16%)

Query: 1   MNN-RSGFREEKPCCYFHPKQVVVGVCPLCLNERLLIVAATQG--QHSKNRSSKASNKVQ 57
           MNN R+G+REEK  CYFHPKQV+VGVCPLCLNERLLI+ A QG   +  + SS +S+++Q
Sbjct: 1   MNNIRNGYREEKSFCYFHPKQVLVGVCPLCLNERLLILFAKQGRHHNRSSSSSISSHRLQ 60

Query: 58  S-SVHTK-PASSIHKIFAFGSLFSRQEWKSDNFDCDVTSPSPEDSFISIKFEE------- 108
           S S H K P+SSIHKIFAFGSLF+R E    N+D D  SP+PE+SFISIKFEE       
Sbjct: 61  SNSRHRKPPSSSIHKIFAFGSLFTRPE-SHHNYDYDDVSPTPEESFISIKFEENGVASWE 119

Query: 109 -STVSNKVSLENCNNKMSWNHHQNNKGTTTTIKSVIEHGKSRDAFRWRKRIGHMFQLIRW 167
            STVS KVS        SWN HQN +      K VIEHGKSRD FRWRKRIGHM QLIRW
Sbjct: 120 KSTVSKKVS--------SWN-HQNKEN-----KRVIEHGKSRDTFRWRKRIGHMLQLIRW 165

Query: 168 KK--GTCHVSSNTSKVEGVKVRKGWM 191
           KK  G CHV    +KVEGVKVRKGWM
Sbjct: 166 KKSGGVCHVG---TKVEGVKVRKGWM 188


>Glyma13g03290.1 
          Length = 224

 Score =  171 bits (432), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/228 (47%), Positives = 131/228 (57%), Gaps = 39/228 (17%)

Query: 1   MNNRSGFREEKPCCYFHPKQVVVGVCPLCLNERLLIVAATQGQHSKNRSSKASNKVQSSV 60
           MN  +  +EEK CCYFHPKQVVVGVCPLCLNERLLI+AA Q  H+ +      +++QSS 
Sbjct: 1   MNRNAHNKEEKGCCYFHPKQVVVGVCPLCLNERLLILAAKQDHHNHH------HRLQSST 54

Query: 61  HTKPASSIHKIFAFGSLFSRQEWKSDN-FDCDVTSPSPED-------------------- 99
             K ++SIHKIFAFGSLF+R + KS N +D D  SPSPE                     
Sbjct: 55  QRKASASIHKIFAFGSLFTRHQLKSHNYYDQDDASPSPEGKTLFYSLMPAFSIVKFSYPY 114

Query: 100 SFISIKFEE--------STVSNKVSLENCNNKMSWNHHQNNKGTTTTIKSVIEHGKSRDA 151
           SFIS+KFEE        ST +N +S  N +NK      Q         KSV+EHGKS +A
Sbjct: 115 SFISMKFEENGVASWEKSTSTNAIS--NISNKKVCVERQVLDKDAKESKSVVEHGKSNNA 172

Query: 152 FRWRKRIGHMFQLIRWKKGTCHVSSNTSKVEGVKVRKGWMMRTLTKRK 199
           FRWRKRIG +   I WK+          +   V  RKGW MRTLTKRK
Sbjct: 173 FRWRKRIGRLVHFIPWKRSNKGGGVGHVEGVKVN-RKGW-MRTLTKRK 218


>Glyma14g23730.1 
          Length = 186

 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 90/174 (51%), Gaps = 21/174 (12%)

Query: 1   MNNRSGFREEKPCCYFHPKQVVVGVCPLCLNERLLIVAATQGQHSKNRSSKASNKVQSSV 60
           MN  +  +EEK CCYFHPKQVVVGVCPLCLNERLLI+AA Q  H  +R     N   +  
Sbjct: 1   MNRNAYNKEEKGCCYFHPKQVVVGVCPLCLNERLLILAANQDHHHHHRLQILHNLTFNQF 60

Query: 61  HTKPASSIHKIFAFGSLFSRQEWKSDNFDCDVTSPSPEDSFISIKFEESTV-----SNKV 115
            T           F +L    +  S  F  +    +        +FEE+ V     SN  
Sbjct: 61  LT----------YFIALLILLKNSSRIFFLEFNGHNT-----LTRFEENGVASWEKSNTT 105

Query: 116 SLENCNNKMSWNHHQNNKGTTTTIKSVIEHGKSRDAFRWRKRIGHMFQLIRWKK 169
           ++ N + K+       +K    + KSV+EHGKS +AFRWRKR+G +   I WK+
Sbjct: 106 AISNMSKKVRVESQVLDKDAKES-KSVVEHGKSNNAFRWRKRMGRLVHFIPWKR 158