Miyakogusa Predicted Gene
- Lj0g3v0272739.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0272739.1 tr|F2DD43|F2DD43_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,34.42,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.18037.1
(261 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g05230.1 313 1e-85
Glyma01g36960.1 297 8e-81
Glyma11g08300.1 286 2e-77
Glyma11g11430.1 172 3e-43
Glyma12g14390.1 166 3e-41
Glyma06g17670.1 162 3e-40
Glyma12g15240.1 108 5e-24
Glyma16g23400.1 108 7e-24
Glyma16g08490.1 71 1e-12
Glyma01g01150.1 69 7e-12
Glyma05g35850.1 65 6e-11
Glyma08g03770.1 60 2e-09
>Glyma02g05230.1
Length = 461
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/263 (63%), Positives = 191/263 (72%), Gaps = 4/263 (1%)
Query: 1 MASENPNQKNSLYPEVITDDPNP-NNPTSSSLYPSID-VSELVENLFPEDTSPSAPPIAA 58
MASENPNQ+NSLYP+VI +P ++ SSSLYP ID V +LVENLFP++TSPSAPP+AA
Sbjct: 1 MASENPNQRNSLYPQVIESEPEACSSNHSSSLYPKIDEVGDLVENLFPDNTSPSAPPVAA 60
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
E+VLIKVPGAILHLIDK+ SVELACG+LTIICLRQG+++VA+YARV DEIQWPLAKDE A
Sbjct: 61 EEVLIKVPGAILHLIDKDCSVELACGNLTIICLRQGQSLVAVYARVGDEIQWPLAKDEAA 120
Query: 119 VKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLSYGLTIA 178
VKVDDSHYFFS RVPKE V LSYGLTIA
Sbjct: 121 VKVDDSHYFFSLRVPKEESDSSSSDEEGEKAKHQNKKKKKNKKNKDSSASV-LSYGLTIA 179
Query: 179 AKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXXXXXXXXXX 238
+KGQE LLKELD+VL ECS FSV +VSEKAKK+GEALD S+ + ++P
Sbjct: 180 SKGQEDLLKELDKVLQECSAFSVQKVSEKAKKEGEALDASLELTISPADLETEEKKEMME 239
Query: 239 XXRCAAYWTTLAPNVEDYSGLAA 261
CAAYWTTLAPNVEDYSG AA
Sbjct: 240 EK-CAAYWTTLAPNVEDYSGTAA 261
>Glyma01g36960.1
Length = 448
Score = 297 bits (760), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 184/274 (67%), Gaps = 39/274 (14%)
Query: 1 MASENPNQKNSLYPEVITDDP-------NPNNPTSS--SLYPSIDVSELVENLFPEDT-- 49
MAS+NPNQ+NSLYP+VI +P NPN +SS SLYPS+D ++LV+NLFPED
Sbjct: 1 MASQNPNQRNSLYPQVIDSNPDAPPPLLNPNRSSSSQPSLYPSVDYNDLVQNLFPEDATA 60
Query: 50 --SPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDE 107
SPSAP A E+ L+++PGAIL+LIDK+YSVELACGD ++I LRQG N VA+YARV DE
Sbjct: 61 AGSPSAPLEATEEALLRIPGAILNLIDKDYSVELACGDFSVIRLRQGDNAVAVYARVADE 120
Query: 108 IQWPLAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 167
IQWPLAKD T VKVDDSHYFFSFRVPK +
Sbjct: 121 IQWPLAKDATTVKVDDSHYFFSFRVPK-------------------------GSDPGEEE 155
Query: 168 LVMLSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXX 227
MLSYGLTIA+KGQEGLLKELD VL CS FSV VSE KKKGEALDGSVA E++P
Sbjct: 156 EDMLSYGLTIASKGQEGLLKELDVVLENCSCFSVQSVSENVKKKGEALDGSVAREVSP-K 214
Query: 228 XXXXXXXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
RCAAYWTTLAPNVEDYSG A
Sbjct: 215 DLESGKKKEMMEGRCAAYWTTLAPNVEDYSGKTA 248
>Glyma11g08300.1
Length = 447
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 183/274 (66%), Gaps = 40/274 (14%)
Query: 1 MASENPNQKNSLYPEVITDDPNPNNP------TSSS---LYPSIDVSELVENLFPEDT-- 49
MAS+NPNQ+NSLYP+VI +P+ +P +SSS LYPS+D ++LVENLF ED
Sbjct: 1 MASQNPNQRNSLYPQVIDSNPDAPSPLLITNHSSSSQPCLYPSVDYNDLVENLFSEDATA 60
Query: 50 --SPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDE 107
SPSAPP A E+VL ++PGAIL+L+DK+YSVELACGD ++I LRQG N VA+YARV DE
Sbjct: 61 ACSPSAPPEATEEVLFRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVADE 120
Query: 108 IQWPLAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 167
IQWPLAKD AVK+DDSHYFFSFRVPK
Sbjct: 121 IQWPLAKDAAAVKLDDSHYFFSFRVPKGFDPDEEED------------------------ 156
Query: 168 LVMLSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXX 227
+LSYGLTIA+KGQE L+K+LD VL CS FSV VSE AKKKGEALDG+VA E++P
Sbjct: 157 --VLSYGLTIASKGQERLVKDLDAVLENCSCFSVQSVSENAKKKGEALDGTVASEVSP-K 213
Query: 228 XXXXXXXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
RCAAYWTTLAPNVEDYSG A
Sbjct: 214 DMESGKKKEMMEERCAAYWTTLAPNVEDYSGKTA 247
>Glyma11g11430.1
Length = 431
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 145/258 (56%), Gaps = 38/258 (14%)
Query: 8 QKNSLYPEVITDDPNPNNPTSSSLYPSIDVS-----ELVENLFPEDTSPSAPPIAAEDVL 62
Q++S YP V + +P+ N+P S+ S S E ENL E+ + + A E+VL
Sbjct: 4 QQSSFYPRVDSTNPDANSPFSNPAPSSSSSSIYPSVETTENLIWEEPNTTTEE-AMENVL 62
Query: 63 IKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETAVKVD 122
+ VPGAILHLI+K+ SV LA GDLTI L +G VVA+ A V D++QWPLAKD +AVK+D
Sbjct: 63 VTVPGAILHLIEKDSSVHLASGDLTISTLGEGDKVVAVLACVGDQVQWPLAKDVSAVKLD 122
Query: 123 DSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLSYGLTIAAKGQ 182
+SHYFF+ +VP+E +L+YGLT+AAKGQ
Sbjct: 123 ESHYFFTVQVPQE--------------------------HGEEKGFEVLNYGLTVAAKGQ 156
Query: 183 EGLLKELDRVLLECSNFSVHEVSEKAKKKG--EALDGSVAMEMTPXXXXXXXXXXXXXXX 240
E +L+ELD VL + S S EK K G E LDGSV+ E +P
Sbjct: 157 ERVLRELDEVLDKYSFLS----KEKLKGVGGWEVLDGSVSTETSPEELQGSEERKEVVEE 212
Query: 241 RCAAYWTTLAPNVEDYSG 258
R AYWTTLAPNVEDYSG
Sbjct: 213 RSGAYWTTLAPNVEDYSG 230
>Glyma12g14390.1
Length = 152
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 106/184 (57%), Gaps = 32/184 (17%)
Query: 65 VPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETAVKVDDS 124
+P IL+LIDK+YSVELACGD + G N V +YARV DEIQW LAKD T +KV+DS
Sbjct: 1 IPDVILNLIDKDYSVELACGDFS------GDNAVTVYARVADEIQWSLAKDATTMKVEDS 54
Query: 125 HYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLSYGLTIAAKGQEG 184
YFFSFRVPK MLS+GLTIA+KGQEG
Sbjct: 55 RYFFSFRVPKGSDPDEEEED-------------------------MLSFGLTIASKGQEG 89
Query: 185 LLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXXXXXXXXXXXXRCAA 244
LLKELD +L CS FS+ VSE KKKGEALDGSV E++P RC A
Sbjct: 90 LLKELDAILENCSCFSMQSVSENVKKKGEALDGSVVREVSP-KDLESRKKKEMMEGRCMA 148
Query: 245 YWTT 248
YWTT
Sbjct: 149 YWTT 152
>Glyma06g17670.1
Length = 159
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 111/196 (56%), Gaps = 38/196 (19%)
Query: 52 SAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWP 111
SAP A ++ L ++P AIL+LIDK+YSVEL CG+ ++I LRQG NVV +YA V DEIQWP
Sbjct: 1 SAPLEATKEALFRIPSAILNLIDKDYSVELVCGNFSVIRLRQGDNVVTMYACVADEIQWP 60
Query: 112 LAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVML 171
L KD T VKVDDSHYFFSF VPK ML
Sbjct: 61 LTKDVTIVKVDDSHYFFSFHVPKGSDPDEEEED-------------------------ML 95
Query: 172 SYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXXX 231
SY LTIA+KGQEGLLKEL + VSE KKKGEALDGSVA E++P
Sbjct: 96 SYDLTIASKGQEGLLKEL------------NSVSENVKKKGEALDGSVAREVSP-KDLES 142
Query: 232 XXXXXXXXXRCAAYWT 247
+CA YW+
Sbjct: 143 GKKKEMMEGQCATYWS 158
>Glyma12g15240.1
Length = 134
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 73/105 (69%), Gaps = 6/105 (5%)
Query: 22 NPNNPTSS--SLYPSIDVSELVENLFPEDT----SPSAPPIAAEDVLIKVPGAILHLIDK 75
NPN +SS S+YP +D ++L++NLFPED SP PP A E+VL+ +PG IL+LIDK
Sbjct: 13 NPNRSSSSEPSVYPFVDYNDLIKNLFPEDVIAAKSPFVPPEATEEVLLWIPGVILNLIDK 72
Query: 76 EYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETAVK 120
+Y+V+LAC D I G VV++Y RV DEIQW LAKD T VK
Sbjct: 73 DYNVDLACSDFFGILFWLGDKVVSVYMRVADEIQWLLAKDTTVVK 117
>Glyma16g23400.1
Length = 453
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 170 MLSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXX 229
+LS+GLTIA+KGQE LLKELD+VL ECS FSV +VSEKAKK+G+ +D SVA+ ++P
Sbjct: 162 VLSHGLTIASKGQEDLLKELDKVLQECSAFSVQKVSEKAKKEGDVVDASVALAISPVDLE 221
Query: 230 XXXXXXXXXXXRCAAYWTTLAPNVEDYSGLA 260
CAAYWTTLAPN+EDYSG A
Sbjct: 222 KEEKKEMMEEK-CAAYWTTLAPNMEDYSGTA 251
>Glyma16g08490.1
Length = 399
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 54 PPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLA 113
P E+V++++PG +HL+D+ ++ELA G TI+ + + +A +V + +QWPL
Sbjct: 52 PKTLKEEVVLQIPGCKVHLMDQGEALELAQGHFTIMKIMEQNVALATIIKVGNSVQWPLT 111
Query: 114 KDETAVKVDDSHYFFSFRV 132
KDE VKVD HY FS V
Sbjct: 112 KDEPVVKVDALHYLFSLPV 130
>Glyma01g01150.1
Length = 377
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 54 PPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNV-VAIYARVDDEIQWPL 112
P ++V++++PG +HL+D+ ++ELA G TI+ + KNV +A +V + +QWPL
Sbjct: 30 PKTLKQEVVLQIPGCKVHLMDEGEAIELAQGHFTIMKIMD-KNVPLATTIKVGNSVQWPL 88
Query: 113 AKDETAVKVDDSHYFFSFRV 132
KDE VKVD HY FS V
Sbjct: 89 TKDEPVVKVDALHYLFSLPV 108
>Glyma05g35850.1
Length = 374
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
++VLI++P +HL+D ++ELA G II + +A +V D++QWPL KDE
Sbjct: 33 QEVLIQIPACKVHLMDGGEALELAQGHFMIIKTFEENVSLATIIKVGDDLQWPLTKDEPV 92
Query: 119 VKVDDSHYFFSFRV 132
VK+D HY FS V
Sbjct: 93 VKLDSLHYLFSLLV 106
>Glyma08g03770.1
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
++VL+++P +HL+D+ ++EL+ G II + +A +V D++QWPL KD
Sbjct: 14 QEVLMQIPACKVHLMDEGEALELSQGHFMIIKTFEENVSLATIIKVGDDLQWPLTKDMPV 73
Query: 119 VKVDDSHYFFSFRV 132
VK+D HY FS V
Sbjct: 74 VKLDSLHYLFSLLV 87