Miyakogusa Predicted Gene

Lj0g3v0272299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0272299.1 tr|A9S6C0|A9S6C0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_75160
,24.15,0.00000001,seg,NULL,CUFF.18003.1
         (381 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g34220.1                                                       383   e-106
Glyma13g36330.1                                                       281   9e-76
Glyma06g42010.1                                                       186   3e-47
Glyma0080s00200.1                                                     128   1e-29

>Glyma12g34220.1 
          Length = 680

 Score =  383 bits (983), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/312 (62%), Positives = 231/312 (74%), Gaps = 18/312 (5%)

Query: 88  NMSWLSNVSQNNILLXXXXXXXXXXXKFEFEFAQESRFQKLIKICALKLGTEAAIELFGK 147
           N+SWLS+VSQ+N+LL           K  F+F QESRFQKL+++CA  LG EA IELFGK
Sbjct: 3   NLSWLSSVSQSNVLLQWKEQSRKKKQKCVFDFTQESRFQKLVEVCARILGPEATIELFGK 62

Query: 148 VGRVPGLKGYNALVEICIDKARGADDEDIAIEEMGKVFQLFKSMTEQGLKLEEQTYRPLL 207
           VGR P +KGYN LVE+CIDKARG DD+DIAI+E+GKVF LFKSM EQGL+L+EQTYRPLL
Sbjct: 63  VGREPDVKGYNTLVEMCIDKARGTDDKDIAIQELGKVFNLFKSMREQGLELQEQTYRPLL 122

Query: 208 LYVIDMHMVEEFQFFCHVIKEENPSSVTRLGYYELMLWLRVNNEEKIQGIYNYIAENDGQ 267
           LY+IDM MVEEFQFFC VI++ENPSSV RLGYYE+++WL+ NNEEKIQGI + IAEN G+
Sbjct: 123 LYLIDMCMVEEFQFFCVVIEDENPSSVARLGYYEMLMWLKDNNEEKIQGICDNIAENKGE 182

Query: 268 DPSNLRESYLLALCESDRXXXXXXXXXXXXXXXXSSAESVAKIFQALGRXXXXXXXXXXX 327
           D S+++E+YLLALCES+R                SSAESVAK+FQALGR           
Sbjct: 183 DTSDIQENYLLALCESERMEEILKLLEIIDIKNLSSAESVAKVFQALGRLLLEPVAEKFL 242

Query: 328 XDFKTS------NYEADNITNFIASYAVSIPNL------------LVEDVITKFKDLHQM 369
            DFKTS      ++EADNIT+FIASYAVSIP+L             V+DVI KFKDLHQ 
Sbjct: 243 LDFKTSVFLHFADHEADNITDFIASYAVSIPDLSVRNILQMVLIISVKDVIKKFKDLHQR 302

Query: 370 LEISPSSSSYEK 381
           LE+SPSSSSYEK
Sbjct: 303 LEVSPSSSSYEK 314


>Glyma13g36330.1 
          Length = 317

 Score =  281 bits (719), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 154/272 (56%), Positives = 178/272 (65%), Gaps = 22/272 (8%)

Query: 84  ERVQNMSWLSNVSQNNILLXXXXXXXXXXXKFEFEFAQESRFQKLIKICALKLGTEAAIE 143
           E + N+SWLS+VSQNNILL           K  F+F QESRFQKLI++CA  LG EA IE
Sbjct: 25  EEMSNLSWLSSVSQNNILLQRKEQSRKKKQKCVFDFTQESRFQKLIEVCARILGPEATIE 84

Query: 144 LFGKVGRVPGLKGYNALVEICIDKARGADDEDIAIEEMGKVFQLFKSMTEQGLKLEEQTY 203
           LFGKVGR PG+KGYN LVE+CIDKARG DDEDI IEE+GKVF LFKS  EQGL+L+EQTY
Sbjct: 85  LFGKVGREPGVKGYNTLVEMCIDKARGTDDEDITIEELGKVFNLFKSTREQGLELQEQTY 144

Query: 204 RPLLLYVIDMHMVEEFQFFCHVIKEENPSSVTRLGYYELMLWLRVNNEEKIQG-----IY 258
           R LLLY+IDM MVEEF+FFC VIK+ENPSSVTRLGYYE++LWL+ NNEEKIQG      +
Sbjct: 145 RLLLLYLIDMRMVEEFKFFCVVIKDENPSSVTRLGYYEMLLWLKDNNEEKIQGESFFLFF 204

Query: 259 NY--------IAENDGQDPSNLRESY------LLAL---CESDRXXXXXXXXXXXXXXXX 301
            Y        +    G+   N+   Y      L A+   CES+R                
Sbjct: 205 FYPHYFRKQSLCICKGKAAYNIPPPYLRIAKSLWAMGYECESERMKEILKLLEIIDIKNL 264

Query: 302 SSAESVAKIFQALGRXXXXXXXXXXXXDFKTS 333
           SSAESVAK+FQALGR            DFKTS
Sbjct: 265 SSAESVAKVFQALGRLLLEPLAEKFLLDFKTS 296


>Glyma06g42010.1 
          Length = 273

 Score =  186 bits (473), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/274 (39%), Positives = 157/274 (57%), Gaps = 15/274 (5%)

Query: 3   MRYSYLRNLCTG---LRSRLAINRGTSN--PQSSSSSRLHEISTLSSLK-LERPSDSGES 56
           MR    RNLCT     RS+L   +  +N  P +  S    +   LSS   L R +  G+S
Sbjct: 1   MRAPTARNLCTLSNLFRSKLLTRKRNTNVVPFTKPSPESEDEMYLSSEPYLARDTSQGDS 60

Query: 57  --SDAVFKQISSIFYGGQ----SLEGPDGANESERVQ--NMSWLSNVSQNNILLXXXXXX 108
              +    ++S I    +    +LE  D  +E +R Q  ++ W+ ++S   +        
Sbjct: 61  FYENEDTNELSDILCSKEDKRCALEEIDD-DEEKRKQTVDIPWILDLSHGKLSEKRKDVA 119

Query: 109 XXXXXKFEFEFAQESRFQKLIKICALKLGTEAAIELFGKVGRVPGLKGYNALVEICIDKA 168
                K+ F++  + RF +LIK+CA KLG    + +FG++GR  G+K YN L+++C+ KA
Sbjct: 120 RERKQKWIFKYTSDDRFDRLIKMCADKLGVGKTVNVFGQLGRETGVKEYNTLIKMCVKKA 179

Query: 169 RGADDEDIAIEEMGKVFQLFKSMTEQGLKLEEQTYRPLLLYVIDMHMVEEFQFFCHVIKE 228
           R  DDE I + EM K F L+KSM + G  LEE+TY PLL Y++DM +V+EFQ F  +IK 
Sbjct: 180 RATDDEFIGVREMSKAFHLYKSMRDLGYPLEEKTYGPLLRYLVDMGLVQEFQLFTDIIKT 239

Query: 229 ENPSSVTRLGYYELMLWLRVNNEEKIQGIYNYIA 262
           ENPSS +RLGYYE++LWLRV NEE I+ I  YI 
Sbjct: 240 ENPSSASRLGYYEMLLWLRVGNEEMIRDICEYIT 273


>Glyma0080s00200.1 
          Length = 141

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 24/149 (16%)

Query: 114 KFEFEFAQESRFQKLIKICALKLGTEAAIELFGKVGRVPGLKGYNALVEICIDKARGADD 173
           K+ F+   + RF +LIK+CA KLG    + +FG +GR  G+K YNAL+++CI KAR  DD
Sbjct: 13  KWIFKCTSDDRFDRLIKMCADKLGAGKTVYVFGHLGRETGVKEYNALIKMCIKKARATDD 72

Query: 174 EDIAIEEMGKVFQLFKSMTEQGLKLEEQTYRPLLLYVIDMHMVEEFQFFCHVIKEENPSS 233
           E I + EM K F LFKSM + G  LEE+TY PLL                         S
Sbjct: 73  EFIGVREMSKAFHLFKSMRDLGYPLEEKTYGPLL------------------------RS 108

Query: 234 VTRLGYYELMLWLRVNNEEKIQGIYNYIA 262
            ++LGYYE++LWLRV +EE IQ I  YI 
Sbjct: 109 ASQLGYYEMLLWLRVGDEEMIQDICEYIT 137