Miyakogusa Predicted Gene

Lj0g3v0272139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0272139.1 Non Chatacterized Hit- tr|I1KF53|I1KF53_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,40.22,0.000005,
,FS359495.path1.1
         (74 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g45170.1                                                        55   1e-08
Glyma12g11810.1                                                        53   7e-08

>Glyma06g45170.1 
          Length = 544

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 24/92 (26%)

Query: 1   MFAQPMYAQRPVNQNQITPGLSTPFPQDQSPI------------------NMHSSFISGN 42
           MFAQ  YA     QNQI  G+ +PFPQ Q PI                  N HS+     
Sbjct: 459 MFAQSQYAAGLAGQNQIAFGMGSPFPQSQPPIFAAQQGFPSTELCSERNLNFHSN----- 513

Query: 43  QHAPHQFNPGPSANYRRKKYNRPGKRGWRPGK 74
             AP QF+P P+AN  RK ++  G++GWRP K
Sbjct: 514 -GAPSQFHPRPNANRGRKTFHGAGRKGWRPPK 544


>Glyma12g11810.1 
          Length = 401

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 21/92 (22%)

Query: 1   MFAQPMYAQRPVNQNQITPGLSTPFPQDQSP------------------INMHSSFISGN 42
           MFAQ  YA     QNQ+  G+ +PFPQ Q P                  +N HS+ ISG 
Sbjct: 313 MFAQSQYAAGLAGQNQMAFGMGSPFPQSQPPMFAAQQGFPSTELHSQRNLNFHSNTISG- 371

Query: 43  QHAPHQFNPGPSANYRRKKYNRPGKRGWRPGK 74
             A  QF+P  +AN  RK ++  G++GWRP K
Sbjct: 372 --ARSQFHPRSNANRGRKTFHGAGRKGWRPPK 401