Miyakogusa Predicted Gene

Lj0g3v0271889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271889.1 tr|A9SGP8|A9SGP8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_164794,37.65,0.000000000000003,seg,NULL,CUFF.17978.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g41300.1                                                       125   1e-29
Glyma06g13560.1                                                       116   7e-27
Glyma03g41950.1                                                        77   4e-15
Glyma19g44630.1                                                        75   1e-14
Glyma16g02630.1                                                        75   3e-14
Glyma07g06040.1                                                        67   7e-12

>Glyma04g41300.1 
          Length = 394

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/137 (51%), Positives = 77/137 (56%)

Query: 1   MAELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXX 60
           ++ELL+ALCHSQT            Y+EKEHILSLFFRQASQLFAYKQW H         
Sbjct: 258 VSELLKALCHSQTRAREAEKAAQRAYSEKEHILSLFFRQASQLFAYKQWLHMLQLENLCL 317

Query: 61  XXRNKNQPLLSLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAVXXXXX 120
             RNKNQ   +LFP++L   P RG L KKS  K  KRKN NRRC I  C VAFAV     
Sbjct: 318 QLRNKNQSFPNLFPASLPWDPCRGRLLKKSHSKARKRKNSNRRCVITKCAVAFAVGLGLA 377

Query: 121 XXXXXXXXXXXXMFPTL 137
                       MFP L
Sbjct: 378 GAGLLLGWTMGWMFPPL 394


>Glyma06g13560.1 
          Length = 279

 Score =  116 bits (291), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 69/109 (63%)

Query: 1   MAELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXX 60
           M+ELL+ALCHSQT            Y+EKEHILSLFFRQASQLFAYKQW H         
Sbjct: 144 MSELLKALCHSQTRAREAEKAAQRAYSEKEHILSLFFRQASQLFAYKQWLHMLQLENLCL 203

Query: 61  XXRNKNQPLLSLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNC 109
             RNKNQ  L+LFP++L   P RG L KKS  K  KR+N N+RC I  C
Sbjct: 204 QLRNKNQSFLNLFPASLPWDPCRGMLLKKSNSKARKRRNSNKRCVIAKC 252


>Glyma03g41950.1 
          Length = 426

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 2   AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
           A+L+EALCHSQT            Y EKEHI++L F+QASQLFAYKQW            
Sbjct: 287 AQLMEALCHSQTRAREAEEAAKKAYAEKEHIVTLIFKQASQLFAYKQWLQLLQLETLCIQ 346

Query: 62  XRNKNQPLLSLFPSALHRVPSRGTLHKKSP-----GKGGKRKNCNRRCGIQNCIVAFAV 115
            ++K+QP+ +LFP AL  +   G   +K        K G+RK  N +C I    VAFA+
Sbjct: 347 IKSKDQPISTLFPVALPWMSYEGRSSRKRKQKICNAKQGERK-ANSKCDITTYAVAFAL 404


>Glyma19g44630.1 
          Length = 426

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 2   AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
           A+L+EALCHSQT            Y EKE I++L F+QASQLFAYKQW            
Sbjct: 287 AQLMEALCHSQTRAREAEEAAKKAYAEKEDIVTLIFKQASQLFAYKQWLQFLQLETLCIQ 346

Query: 62  XRNKNQPLLSLFPSALHRVPSRGTLHKK-----SPGKGGKRKNCNRRCGIQNCIVAFAV 115
            ++K+QP+ +LFP AL  +   G   +K     S  K G+RK  N +C I    VAFA+
Sbjct: 347 IKSKDQPISTLFPVALPWMSYEGRSSRKRKQKISNSKQGERK-ANSKCDITTYAVAFAL 404


>Glyma16g02630.1 
          Length = 383

 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 2   AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
           A+L+EALCHSQT              EKEH ++LFF QASQLFAYKQWF           
Sbjct: 252 AQLMEALCHSQTRARKAEEAAKQACAEKEHTIALFFIQASQLFAYKQWFQLLQLEALNTQ 311

Query: 62  XRNKNQPLLSLFPSALHRVPSRGTL 86
            +NK+QP+ +LFP  + R P    L
Sbjct: 312 VKNKDQPISTLFP-WIRRKPGETKL 335


>Glyma07g06040.1 
          Length = 444

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 42/73 (57%)

Query: 2   AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
           A+L+EALCH QT              EKE+ ++LFF QASQLFAYKQWF           
Sbjct: 313 AQLMEALCHFQTRARKAEEAAKQACAEKENTIALFFIQASQLFAYKQWFQLLQLEALNSQ 372

Query: 62  XRNKNQPLLSLFP 74
            +NK+Q + +LFP
Sbjct: 373 VKNKDQSISTLFP 385