Miyakogusa Predicted Gene

Lj0g3v0271879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271879.1 Non Chatacterized Hit- tr|G7I3G5|G7I3G5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.95,6e-19,Pcc1,EKC/KEOPS complex, subunit
Pcc1,CUFF.17975.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g17990.1                                                       134   2e-32
Glyma17g29540.1                                                       127   3e-30
Glyma14g16690.1                                                       124   3e-29
Glyma14g16960.1                                                       122   7e-29

>Glyma11g17990.1 
          Length = 91

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 72/80 (90%)

Query: 14 DLEVDFGCEENASIVYAALAVDKELHPDKVTQLMKVSNGKLSVHFEAVEARFLRASFSAF 73
          D+E+ FG EENASIVYAALAVDKEL PDKV +LM VS+GKLSVHFEA EARFLRASFSAF
Sbjct: 12 DMEMYFGSEENASIVYAALAVDKELQPDKVKRLMTVSDGKLSVHFEATEARFLRASFSAF 71

Query: 74 LDVLTLATNTIEEFGQGMEL 93
          +DVLTLAT TIEEFGQ M+L
Sbjct: 72 VDVLTLATKTIEEFGQVMKL 91


>Glyma17g29540.1 
          Length = 89

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/80 (81%), Positives = 71/80 (88%), Gaps = 2/80 (2%)

Query: 14 DLEVDFGCEENASIVYAALAVDKELHPDKVTQLMKVSNGKLSVHFEAVEARFLRASFSAF 73
          D+E+ FG EENASIVYAALAVDKE  PDKV +LM VS+GKLSVHFEA EARFLRASFSAF
Sbjct: 12 DMEMYFGSEENASIVYAALAVDKE--PDKVKRLMTVSDGKLSVHFEATEARFLRASFSAF 69

Query: 74 LDVLTLATNTIEEFGQGMEL 93
          +DVLTLAT TIEEFGQ M+L
Sbjct: 70 VDVLTLATKTIEEFGQVMKL 89


>Glyma14g16690.1 
          Length = 73

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/80 (77%), Positives = 68/80 (85%), Gaps = 7/80 (8%)

Query: 14 DLEVDFGCEENASIVYAALAVDKELHPDKVTQLMKVSNGKLSVHFEAVEARFLRASFSAF 73
          D+E+DFG EENASIVYAALAVDKEL PDKV +LM       +VHFEA EARFLRASFSAF
Sbjct: 1  DMEMDFGSEENASIVYAALAVDKELQPDKVKRLM-------TVHFEATEARFLRASFSAF 53

Query: 74 LDVLTLATNTIEEFGQGMEL 93
          +DVLTLAT TIEEFGQGM+L
Sbjct: 54 VDVLTLATKTIEEFGQGMKL 73


>Glyma14g16960.1 
          Length = 73

 Score =  122 bits (307), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 68/80 (85%), Gaps = 7/80 (8%)

Query: 14 DLEVDFGCEENASIVYAALAVDKELHPDKVTQLMKVSNGKLSVHFEAVEARFLRASFSAF 73
          D+E+DFG EENASIVYAALAVDKEL PDKV +LM       +VHFEA +ARFLRASFSAF
Sbjct: 1  DMEMDFGSEENASIVYAALAVDKELQPDKVKRLM-------TVHFEATKARFLRASFSAF 53

Query: 74 LDVLTLATNTIEEFGQGMEL 93
          +DVLTLAT TIEEFGQGM+L
Sbjct: 54 VDVLTLATKTIEEFGQGMKL 73