Miyakogusa Predicted Gene

Lj0g3v0271729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271729.1 tr|Q6H525|Q6H525_ORYSJ Os02g0230300 protein
OS=Oryza sativa subsp. japonica GN=OSJNBb0035N08.30
PE=4,40.51,9e-19,seg,NULL,CUFF.17992.1
         (345 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g42260.2                                                       107   2e-23
Glyma08g42260.1                                                       107   3e-23
Glyma02g45690.1                                                       105   6e-23
Glyma18g12670.1                                                       104   2e-22
Glyma02g44940.1                                                        76   5e-14
Glyma02g44950.1                                                        76   6e-14

>Glyma08g42260.2 
          Length = 266

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 2/82 (2%)

Query: 266 CNYWSTHPXXXXXXXXXXXXXXSAFGVTN--APGFGAGISLPQALSNTRSDGLGALYREG 323
           CNYW  HP              SAFGVT    PGF  G+SLPQALSNTR+DGLGALYREG
Sbjct: 154 CNYWRNHPAIIWGILGWWGTLGSAFGVTGTTVPGFSPGLSLPQALSNTRTDGLGALYREG 213

Query: 324 TASYLNSLVNSKFPFTTNQVRE 345
           TAS+LNS+VN+KFP+TTNQVR+
Sbjct: 214 TASFLNSMVNNKFPYTTNQVRD 235


>Glyma08g42260.1 
          Length = 272

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 2/82 (2%)

Query: 266 CNYWSTHPXXXXXXXXXXXXXXSAFGVTN--APGFGAGISLPQALSNTRSDGLGALYREG 323
           CNYW  HP              SAFGVT    PGF  G+SLPQALSNTR+DGLGALYREG
Sbjct: 160 CNYWRNHPAIIWGILGWWGTLGSAFGVTGTTVPGFSPGLSLPQALSNTRTDGLGALYREG 219

Query: 324 TASYLNSLVNSKFPFTTNQVRE 345
           TAS+LNS+VN+KFP+TTNQVR+
Sbjct: 220 TASFLNSMVNNKFPYTTNQVRD 241



 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 57  MQSKRSHXXXXXXXXXXXXXXXXXXIIPVMSSTVGEQKNYYTPDPHAGTPPTGFSDSL 114
           M+ KRSH                  +IPV+S+TV +QKNYYTPDPHAG+PP+GFSDSL
Sbjct: 1   MERKRSHASFTMFAMLVGVISQSL-VIPVVSTTVEDQKNYYTPDPHAGSPPSGFSDSL 57


>Glyma02g45690.1 
          Length = 451

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 61/80 (76%)

Query: 266 CNYWSTHPXXXXXXXXXXXXXXSAFGVTNAPGFGAGISLPQALSNTRSDGLGALYREGTA 325
           CNYW+THP               AFGV++ PGFGA  SLPQALSNTR+DGLGALYREGTA
Sbjct: 341 CNYWNTHPGIIWGLLGWWGTLGHAFGVSSIPGFGASRSLPQALSNTRTDGLGALYREGTA 400

Query: 326 SYLNSLVNSKFPFTTNQVRE 345
           S+LNSLVN++FP+TT QVR+
Sbjct: 401 SFLNSLVNNRFPYTTQQVRD 420


>Glyma18g12670.1 
          Length = 270

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 59/82 (71%), Gaps = 2/82 (2%)

Query: 266 CNYWSTHPXXXXXXXXXXXXXXSAFGVTN--APGFGAGISLPQALSNTRSDGLGALYREG 323
           C YW  HP              SAFGVT    PGF  G+SLPQALSNTR+DGLGALYREG
Sbjct: 158 CKYWRNHPAIIWGILGWWGTLGSAFGVTGTTVPGFSPGLSLPQALSNTRTDGLGALYREG 217

Query: 324 TASYLNSLVNSKFPFTTNQVRE 345
           TAS+LNS+VN+KFP+TTNQVR+
Sbjct: 218 TASFLNSMVNNKFPYTTNQVRD 239



 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 57  MQSKRSHXXXXXXXXXXXXXXXXXXIIPVMSSTVGEQKNYYTPDPHAGTPPTGFSDSL 114
           M+ KRSH                  +IPV+S+TV +QKNYYTPDPHAG+PPTGFSDSL
Sbjct: 1   MERKRSHASFTMFAMLVGLLSQSL-VIPVISTTVADQKNYYTPDPHAGSPPTGFSDSL 57


>Glyma02g44940.1 
          Length = 108

 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 1/79 (1%)

Query: 268 YWSTHPXXXXXXXXXXXXXXSAFGVTNAPG-FGAGISLPQALSNTRSDGLGALYREGTAS 326
           YWS++P              SAFGV ++     + +SL  ALSNT SDGLGAL REGTAS
Sbjct: 1   YWSSNPGRIKEVLGWVGTIGSAFGVGSSNNKIPSNVSLVHALSNTTSDGLGALCREGTAS 60

Query: 327 YLNSLVNSKFPFTTNQVRE 345
           +LNSLVN+KFP+TT QVR+
Sbjct: 61  FLNSLVNNKFPYTTPQVRD 79


>Glyma02g44950.1 
          Length = 85

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 1/79 (1%)

Query: 268 YWSTHPXXXXXXXXXXXXXXSAFGVTNAPG-FGAGISLPQALSNTRSDGLGALYREGTAS 326
           YWS++P              SAFGV ++     + +SL  ALSNT SDGLGAL REGTAS
Sbjct: 1   YWSSNPGRIKEVLGWVGTIGSAFGVGSSNNKIPSNVSLVHALSNTTSDGLGALCREGTAS 60

Query: 327 YLNSLVNSKFPFTTNQVRE 345
           +LNSLVN+KFP+TT QVR+
Sbjct: 61  FLNSLVNNKFPYTTPQVRD 79