Miyakogusa Predicted Gene
- Lj0g3v0271229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0271229.1 Non Chatacterized Hit- tr|I1M6H3|I1M6H3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,55.56,0.000000000000004,Pectin lyase-like,Pectin lyase
fold/virulence factor; no description,NULL; no description,Pectin
lya,CUFF.17925.1
(186 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g46890.1 112 2e-25
Glyma14g01820.1 105 2e-23
Glyma14g01830.1 86 2e-17
Glyma02g46880.1 84 6e-17
Glyma04g41400.1 63 2e-10
Glyma06g13450.1 62 2e-10
Glyma16g33080.1 56 2e-08
Glyma09g28260.1 56 2e-08
Glyma20g35600.1 54 1e-07
Glyma10g32040.1 52 5e-07
>Glyma02g46890.1
Length = 349
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 69/79 (87%), Gaps = 3/79 (3%)
Query: 48 AIMDLAEDGHDNRVRSYISWEDLKVDEQSLALKSNNDVRVIMVDQHGREHSKTVQGAVDM 107
A +DLAE G VR+YISWEDL+VDEQ LA+ S+N+VRVI+V+Q+G HSKTVQGAV+M
Sbjct: 14 AQVDLAEGGG---VRNYISWEDLQVDEQRLAVNSHNNVRVIIVNQNGGGHSKTVQGAVNM 70
Query: 108 VPDHNTKRVKIYMFPGVYR 126
VPD+NT+RVKIY++PG+YR
Sbjct: 71 VPDNNTQRVKIYIYPGIYR 89
>Glyma14g01820.1
Length = 363
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%), Gaps = 4/88 (4%)
Query: 40 VKLHFTQSAIMDLAEDGHDNRVRSYISWEDLKVDEQSLALKSN-NDVRVIMVDQHGREHS 98
V + + ++DLAE G VR+YISWEDL+V+EQ LA+KS+ N VRVI V+Q+G HS
Sbjct: 19 VSIFVIWAQVVDLAEGGA---VRNYISWEDLQVNEQRLAVKSSHNQVRVITVNQNGGGHS 75
Query: 99 KTVQGAVDMVPDHNTKRVKIYMFPGVYR 126
KTVQGAV+MVPD+N +RVKI++FPG+YR
Sbjct: 76 KTVQGAVNMVPDNNRQRVKIFIFPGIYR 103
>Glyma14g01830.1
Length = 351
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 55 DGHDNRVRSYISWEDLKVDEQSLALKSNNDVRVIMVDQHGREHSKTVQGAVDMVPDHNTK 114
D + R++I+WED VDEQ + SN R+I+VDQ G+ S TVQGAVDMVP +NT+
Sbjct: 4 DTDSDHARNFITWEDFMVDEQ--GITSNVGGRIIVVDQSGKGDSTTVQGAVDMVPQNNTE 61
Query: 115 RVKIYMFPGVYR 126
RVKIY++PG+YR
Sbjct: 62 RVKIYIYPGIYR 73
>Glyma02g46880.1
Length = 327
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 55 DGHDNRVRSYISWEDLKVDEQSLALKSNNDVRVIMVDQHGREHSKTVQGAVDMVPDHNTK 114
D + R++I+WED VDEQ + SN R+I+VDQ G S TVQGAVDMVP +NT+
Sbjct: 4 DTDSDHARNFITWEDFMVDEQ--GITSNVGGRIIVVDQTGNGDSTTVQGAVDMVPQNNTE 61
Query: 115 RVKIYMFPGVYR 126
RVKIY++PG+YR
Sbjct: 62 RVKIYIYPGIYR 73
>Glyma04g41400.1
Length = 524
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 9 SDIASSLLETVLTEPKNALGNQYKKMFQINGVKLHFTQSAIMDLA 53
S + + L VLTEPKNALG QYKKMFQ+NGVKLHFT++A+ +A
Sbjct: 380 SALTENQLIQVLTEPKNALGKQYKKMFQMNGVKLHFTENALRSIA 424
>Glyma06g13450.1
Length = 524
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 35/88 (39%)
Query: 1 MGTGGVMDSDIASSLLETV-----------------------------------LTEPKN 25
M TG V ++ +ASSLLETV L+EPKN
Sbjct: 337 MRTGKVTEAAVASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLSEPKN 396
Query: 26 ALGNQYKKMFQINGVKLHFTQSAIMDLA 53
ALG QYKKMFQ+NGVKLHFT++A+ +A
Sbjct: 397 ALGKQYKKMFQMNGVKLHFTENALRSIA 424
>Glyma16g33080.1
Length = 689
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 35/89 (39%)
Query: 1 MGTGGVMDSDIASSLLETV-----------------------------------LTEPKN 25
M GG+ DS + SSLLE+V LTEPKN
Sbjct: 500 MRAGGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMMVLTEPKN 559
Query: 26 ALGNQYKKMFQINGVKLHFTQSAIMDLAE 54
ALG QYKK+F +N VKLHFT+ A+ +A+
Sbjct: 560 ALGKQYKKLFSMNNVKLHFTEKALRLIAK 588
>Glyma09g28260.1
Length = 659
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 9 SDIASSLLETVLTEPKNALGNQYKKMFQINGVKLHFTQSAIMDLAE 54
S + L VLTEPKNALG QYKK+F +N VKLHFT++A+ +A+
Sbjct: 513 SALTEDQLTMVLTEPKNALGKQYKKLFSMNNVKLHFTENALRLIAK 558
>Glyma20g35600.1
Length = 506
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 35/89 (39%)
Query: 1 MGTGGVMDSDIASSLLETV-----------------------------------LTEPKN 25
M TGGV ++ + SSLLE+V LTEPKN
Sbjct: 317 MRTGGVTNAAVTSSLLESVESADLIAYGLIPEFIGRFPILISLSALTEDQLMQVLTEPKN 376
Query: 26 ALGNQYKKMFQINGVKLHFTQSAIMDLAE 54
AL QYKK+F +N VKLHFT+ A+ +A+
Sbjct: 377 ALAKQYKKLFNMNNVKLHFTEKALRLIAK 405
>Glyma10g32040.1
Length = 413
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 25/73 (34%)
Query: 1 MGTGGVMDSDIASSLLETV-------------------------LTEPKNALGNQYKKMF 35
M GG+ ++ + SSLLE+V L EPKNAL QYKK+F
Sbjct: 234 MRAGGITNAAVTSSLLESVESADLIAYGLIPDLSALTEDQLMQVLIEPKNALAKQYKKLF 293
Query: 36 QINGVKLHFTQSA 48
N VKLHFT+ A
Sbjct: 294 NTNNVKLHFTEKA 306