Miyakogusa Predicted Gene

Lj0g3v0269659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269659.1 Non Chatacterized Hit- tr|I1IFN5|I1IFN5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,57.69,3e-19,PRENYLTRANSFERASES,NULL,CUFF.17815.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44900.1                                                       129   8e-31
Glyma09g40920.1                                                        80   6e-16

>Glyma18g44900.1 
          Length = 398

 Score =  129 bits (324), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 66/77 (85%)

Query: 22  LMMFSILGMQDKEDDLKVGVKSTALRFGDLTKEWITGFGFACLGNVALSGFNAELGWPYY 81
           L+  +I   QDKEDDLKVGVKSTALRFGD TKEWITGFG ACLG +A+SGFNAE+GWPYY
Sbjct: 289 LVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWITGFGIACLGGLAVSGFNAEIGWPYY 348

Query: 82  ACLAAASGHLGWQVWKL 98
           A LA ASGHLGWQ+W +
Sbjct: 349 ASLAVASGHLGWQIWTV 365


>Glyma09g40920.1 
          Length = 441

 Score = 80.1 bits (196), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/78 (53%), Positives = 48/78 (61%), Gaps = 15/78 (19%)

Query: 22  LMMFSILGMQDKEDDLKVGVKSTALRFGDLTKEWITGFGFACLGNVALSGFNAEL-GWPY 80
           L+  +I   QDKEDD KVG              WITGF  ACLG +A+SGFNAE+ GW Y
Sbjct: 343 LVYDTIYAHQDKEDDQKVG--------------WITGFEIACLGGLAVSGFNAEIAGWLY 388

Query: 81  YACLAAASGHLGWQVWKL 98
           YA LA  SGHLGWQ W +
Sbjct: 389 YASLAVVSGHLGWQTWAV 406