Miyakogusa Predicted Gene

Lj0g3v0269649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269649.1 Non Chatacterized Hit- tr|I1IUZ7|I1IUZ7_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,50.38,2e-19,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.17814.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44910.1                                                       215   9e-57
Glyma09g40910.1                                                       211   2e-55
Glyma09g40910.2                                                       190   3e-49
Glyma03g12660.1                                                       108   1e-24
Glyma18g30080.1                                                       107   4e-24
Glyma10g02560.1                                                        90   5e-19
Glyma03g36890.1                                                        90   7e-19
Glyma02g17240.1                                                        89   2e-18
Glyma19g39540.1                                                        88   3e-18
Glyma01g39970.1                                                        54   4e-08
Glyma11g05320.1                                                        54   5e-08
Glyma05g22220.1                                                        54   5e-08
Glyma17g17770.1                                                        54   5e-08

>Glyma18g44910.1 
          Length = 548

 Score =  215 bits (548), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 113/135 (83%), Positives = 117/135 (86%), Gaps = 2/135 (1%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELKLEIS 60
           MVVQVLY EQLRLKNA           QRISSGVPSAAMSPRDNYASLRRENRELKLEIS
Sbjct: 414 MVVQVLYFEQLRLKNALSGSSGDGLLSQRISSGVPSAAMSPRDNYASLRRENRELKLEIS 473

Query: 61  RLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRIAMFSSQGRGKRQKSVRKSR 120
           R+RVRLSELEKEQMFMKQG+I K GNGRTFLTS+SKGIGRIA+FSSQG GKRQKS RKSR
Sbjct: 474 RMRVRLSELEKEQMFMKQGIIDKAGNGRTFLTSLSKGIGRIAIFSSQGGGKRQKSGRKSR 533

Query: 121 --EGKTGRSRRYSVS 133
             EGKTGRSRRYSVS
Sbjct: 534 GSEGKTGRSRRYSVS 548


>Glyma09g40910.1 
          Length = 548

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 111/135 (82%), Positives = 115/135 (85%), Gaps = 2/135 (1%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELKLEIS 60
           MVVQVLY EQLRLKNA           QRISSGVPSAAMSPRDNYASLRRENRELKLEIS
Sbjct: 414 MVVQVLYFEQLRLKNAMSGSLGDGLLSQRISSGVPSAAMSPRDNYASLRRENRELKLEIS 473

Query: 61  RLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRIAMFSSQGRGKRQKSVRKSR 120
           R+RVRLSELEKEQMFMKQGMI K GNGRTFLTS+SKGIGRIA+FS QG GK QKS RKSR
Sbjct: 474 RMRVRLSELEKEQMFMKQGMIDKAGNGRTFLTSLSKGIGRIAIFSGQGGGKHQKSGRKSR 533

Query: 121 --EGKTGRSRRYSVS 133
             EGKTGRSRR+SVS
Sbjct: 534 GLEGKTGRSRRHSVS 548


>Glyma09g40910.2 
          Length = 538

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 97/124 (78%), Positives = 101/124 (81%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELKLEIS 60
           MVVQVLY EQLRLKNA           QRISSGVPSAAMSPRDNYASLRRENRELKLEIS
Sbjct: 414 MVVQVLYFEQLRLKNAMSGSLGDGLLSQRISSGVPSAAMSPRDNYASLRRENRELKLEIS 473

Query: 61  RLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRIAMFSSQGRGKRQKSVRKSR 120
           R+RVRLSELEKEQMFMKQGMI K GNGRTFLTS+SKGIGRIA+FS QG GK QKS  + R
Sbjct: 474 RMRVRLSELEKEQMFMKQGMIDKAGNGRTFLTSLSKGIGRIAIFSGQGGGKHQKSAAELR 533

Query: 121 EGKT 124
              T
Sbjct: 534 SNTT 537


>Glyma03g12660.1 
          Length = 499

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/108 (55%), Positives = 78/108 (72%), Gaps = 7/108 (6%)

Query: 2   VVQVLYVEQLRLKNAXXX-----XXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELK 56
           +VQVLY EQLRL+N+                 RISSG  SAAMSPRDNYASLRRENRELK
Sbjct: 363 IVQVLYFEQLRLRNSLSCSYGEDDPKPIHQSWRISSGALSAAMSPRDNYASLRRENRELK 422

Query: 57  LEISRLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRIAMF 104
           LE++RLR+RL++LE+E + MK+ M  K G+ R F++S SK IG++++F
Sbjct: 423 LELARLRMRLNDLEREHVCMKRDMA-KSGS-RKFMSSFSKKIGKLSLF 468


>Glyma18g30080.1 
          Length = 594

 Score =  107 bits (267), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 77/108 (71%), Gaps = 7/108 (6%)

Query: 2   VVQVLYVEQLRLKNAXXXXXXXXXX-----XQRISSGVPSAAMSPRDNYASLRRENRELK 56
           +VQVLY EQLRL+N+                 RISSG  SAAMSPRDNYASLRREN ELK
Sbjct: 458 IVQVLYFEQLRLRNSLSCSYAEDDTKPIHQSWRISSGALSAAMSPRDNYASLRRENCELK 517

Query: 57  LEISRLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRIAMF 104
           LE++RLR+RL++LE+E + MK+ M  K G+ R F++S SK IG++++F
Sbjct: 518 LELARLRMRLNDLEREHVCMKRDMT-KSGS-RKFMSSFSKKIGKLSLF 563


>Glyma10g02560.1 
          Length = 563

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 19/144 (13%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXX--------XXXQRISSGVPSAAMSPRDNYASLRREN 52
           M VQVLY EQ+RL+NA                   QR  SG  S A+SPRDNYAS+RREN
Sbjct: 428 MAVQVLYFEQIRLRNAMNGGHNQLFFGGGLNGPFPQRSGSGAGSGAISPRDNYASVRREN 487

Query: 53  RELKLEISRLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRI-AMFSSQGRGK 111
           RELKLE++R+R+RL++LEK+ + MKQ ++      + F  S +K + ++ AMF       
Sbjct: 488 RELKLEVARMRMRLTDLEKDHVNMKQELVRSHPANKLF-KSFTKKLSKLNAMF------- 539

Query: 112 RQKSVRKSREGK--TGRSRRYSVS 133
           R  S++   E +    + RR+SVS
Sbjct: 540 RINSIKPGSESRFPFPKRRRHSVS 563


>Glyma03g36890.1 
          Length = 667

 Score = 89.7 bits (221), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 3/84 (3%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXXXXXQ---RISSGVPSAAMSPRDNYASLRRENRELKL 57
           MVVQVLY EQ+RL+NA           Q   R  SG  S A+SPRDNYAS+RRENRELKL
Sbjct: 493 MVVQVLYFEQMRLRNAMNGGHNQLFFGQFPHRSGSGAGSGAISPRDNYASVRRENRELKL 552

Query: 58  EISRLRVRLSELEKEQMFMKQGMI 81
           E++R+R+RL++LEK+ + MKQ ++
Sbjct: 553 EVARMRMRLTDLEKDHVSMKQELV 576


>Glyma02g17240.1 
          Length = 615

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 12/115 (10%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXX----------XXXQRISSGVPSAAMSPRDNYASLRR 50
           M VQVLY EQ+RL+NA                     QR  SG  S A+SPRDNYAS+RR
Sbjct: 477 MAVQVLYFEQIRLRNAMSGGHSHVFFGGGAGLNGQFPQRSGSGAGSGAISPRDNYASVRR 536

Query: 51  ENRELKLEISRLRVRLSELEKEQMFMKQGMIHKVGNGRTFLTSISKGIGRI-AMF 104
           ENRELKLE++R+R+RL++LEK+ + MKQ ++ K         S +K + ++ AMF
Sbjct: 537 ENRELKLEVARMRMRLTDLEKDHVNMKQELV-KSHPANKLFKSFTKKLSKLNAMF 590


>Glyma19g39540.1 
          Length = 597

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)

Query: 2   VVQVLYVEQLRLKNAXXXXXXXXXXXQ---RISSGVPSAAMSPRDNYASLRRENRELKLE 58
           VVQVLY+EQ+RL+NA           Q   R  SG  S A+SPRDNYAS+RRENRELKLE
Sbjct: 463 VVQVLYLEQMRLRNAMNGGHNQVFFGQFPHRSGSGAGSGAISPRDNYASVRRENRELKLE 522

Query: 59  ISRLRVRLSELEKEQMFMKQGMIHKVGNGRTF 90
           ++R+R+RL++LEK+ + MKQ ++      + F
Sbjct: 523 VARMRMRLTDLEKDHVSMKQELVKSHPANKLF 554


>Glyma01g39970.1 
          Length = 591

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 19/144 (13%)

Query: 2   VVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDN-YASLRRENRELKLEIS 60
           VVQVLY EQ RL+NA                 V S  + P  N  ++LRREN +LKLE+ 
Sbjct: 455 VVQVLYYEQQRLRNAMNGSRSGESSVDS-KLNVYSTDLHPVSNELSTLRRENEDLKLELV 513

Query: 61  RLRVRLSELEKEQM--FMKQGMIHKVGNG-------RTFLTSISKGIGRIAMFSSQGRGK 111
           +L++RL E+E   +   +    +    +        R+F++S+SK +GR++ F       
Sbjct: 514 KLKMRLKEIENSTLKSTVNSPAVSASPSADKPPLPRRSFMSSVSKKLGRLSPFV------ 567

Query: 112 RQKSVRKSREGKT--GRSRRYSVS 133
           R   V    +G+T   ++RR+S+S
Sbjct: 568 RADGVLPFPKGRTKPNKNRRHSIS 591


>Glyma11g05320.1 
          Length = 617

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 23/146 (15%)

Query: 2   VVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDN-YASLRRENRELKLEIS 60
           VVQVLY EQ RL++A                 V S  + P  N  ++LRREN +LKLE+ 
Sbjct: 481 VVQVLYYEQQRLRDAMNGSGSGESSVDS-KLNVYSTDLHPVSNELSTLRRENEDLKLELV 539

Query: 61  RLRVRLSELEKEQMFMKQGMIHKVGNG-----------RTFLTSISKGIGRIAMFSSQGR 109
           +L++RL E+E     +K  +   V +            R+F++S+SK +GR++ F     
Sbjct: 540 KLKMRLKEIENST--LKSTVNSPVVSASPSADKPPLPRRSFMSSVSKKLGRLSPFV---- 593

Query: 110 GKRQKSVRKSREGKT--GRSRRYSVS 133
             R   V    +G+T   ++RR+S+S
Sbjct: 594 --RADGVSPFAKGRTKPNKNRRHSIS 617


>Glyma05g22220.1 
          Length = 590

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 16/144 (11%)

Query: 1   MVVQVLYVEQLRLKNAXX--XXXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELKLE 58
           MVVQVLY EQ RL+++              +++S  P+      +  + LRREN +LKLE
Sbjct: 452 MVVQVLYYEQQRLRDSMDGNAGWDSPNFRDKVNSS-PNELNLVSNELSILRRENEDLKLE 510

Query: 59  ISRLRVRLSELEKEQ---------MFMKQGMIHKVGNGRTFLTSISKGIGRIAMFSSQGR 109
           I +L+++L E+E+           +F            ++F+ S+SK +GR++ FS   R
Sbjct: 511 IVKLKMKLKEIERTSIRSASSSPVIFASPSADKPPLPRKSFINSVSKKLGRLSPFS---R 567

Query: 110 GKRQKSVRKSREGKTGRSRRYSVS 133
           G    ++ K    K  ++RR+S+S
Sbjct: 568 GNAATTLLKGH-VKPDKNRRHSIS 590


>Glyma17g17770.1 
          Length = 583

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 29/147 (19%)

Query: 1   MVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYAS-----LRRENREL 55
           MVVQVLY EQ RL+++              S+G  S     + N +      LRREN++L
Sbjct: 452 MVVQVLYYEQQRLRDSMDS-----------SAGWDSPNFLDKVNSSPNELSILRRENQDL 500

Query: 56  KLEISRLRVRLSELEKEQ---------MFMKQGMIHKVGNGRTFLTSISKGIGRIAMFSS 106
           KLEI +L++RL E E+           ++  +         ++F+ S+SK +GR++ FS 
Sbjct: 501 KLEIVKLKMRLKEFERTSIRSASSSPVIYASRSADKPPLPRKSFINSVSKKLGRLSPFS- 559

Query: 107 QGRGKRQKSVRKSREGKTGRSRRYSVS 133
             RG       K R  K  ++RR+S+S
Sbjct: 560 --RGDAATIPPKGR-VKPDKNRRHSIS 583