Miyakogusa Predicted Gene
- Lj0g3v0269309.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0269309.2 Non Chatacterized Hit- tr|C5Z1J4|C5Z1J4_SORBI
Putative uncharacterized protein Sb10g011520
OS=Sorghu,44.34,2e-19,Dimer_Tnp_hAT,HAT dimerisation; HAT DIMERISATION
DOMAIN-CONTAINING PROTEIN,NULL; UNCHARACTERIZED,NUL,CUFF.17793.2
(134 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g09280.2 89 1e-18
Glyma15g21390.1 84 4e-17
Glyma08g23300.1 77 5e-15
Glyma01g06780.1 75 2e-14
Glyma10g22870.1 71 4e-13
Glyma19g06720.1 71 4e-13
Glyma16g19440.1 68 3e-12
Glyma18g24520.1 66 8e-12
Glyma09g27290.1 55 2e-08
>Glyma09g09280.2
Length = 750
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 2 FGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKK 61
FG++ AI R + PA WW+ +G S L +A++ILS TC + CE +WS+++QIH K+
Sbjct: 559 FGTELAISTRTGLEPAAWWQQHGISCLELQRIAVRILSQTCSSFACEHDWSIYDQIHCKR 618
Query: 62 RNKLEHKRLEDLVFVKYNQEL 82
+N+L K+L D+++V YN L
Sbjct: 619 QNRLSQKKLNDIIYVHYNLRL 639
>Glyma15g21390.1
Length = 1523
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 2 FGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKK 61
FG++ AI R + PA WW+ +G S L ++++ILS TC + CE +WS+++QI K+
Sbjct: 708 FGTELAISTRTGLEPAAWWQQHGISCLELQRISVRILSQTCSSFACEHDWSIYDQIRCKR 767
Query: 62 RNKLEHKRLEDLVFVKYNQEL 82
+N+L K+L D+++V YN L
Sbjct: 768 QNRLSQKKLNDIIYVHYNLRL 788
>Glyma08g23300.1
Length = 671
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 AIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKKRNKLE 66
++ RG + P WW ++G +TP L + +K+L+ C + CERNWS + IH+ KRNK+
Sbjct: 543 SLNDRGQMDPKAWWLVHGVNTPILQKVTLKLLAQPCSSSCCERNWSTYSFIHSLKRNKMA 602
Query: 67 HKRLEDLVFVKYNQELVRR 85
R EDLVFV N L+ R
Sbjct: 603 PHRAEDLVFVHSNLRLLSR 621
>Glyma01g06780.1
Length = 653
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 10 QRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKKRNKLEHKR 69
+RG + P WW ++G + P L +A+K+L+ C + CERNWS + IH+ KRNK+ +
Sbjct: 528 KRGQMDPKAWWLVHGINAPILQKIALKLLAQPCSSSCCERNWSTYSFIHSLKRNKMAPHK 587
Query: 70 LEDLVFVKYNQELVRR 85
EDLVFV N L+ R
Sbjct: 588 AEDLVFVHSNLRLLSR 603
>Glyma10g22870.1
Length = 244
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 10/77 (12%)
Query: 26 STPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKKRNKLEHKRLEDLVFVKYNQELVRR 85
S P L LAI ILS TC A CE NW+VFE IH+KKRN LEH++L DLV+ K Q
Sbjct: 98 SVPQLQKLAICILSQTCSASSCEWNWNVFEYIHSKKRNWLEHQKLNDLVYEKRQQ----- 152
Query: 86 YNIRDELDPISLDDIDE 102
DPI+L+ +D+
Sbjct: 153 -----SYDPINLEALDD 164
>Glyma19g06720.1
Length = 3023
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 7 AIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKKRNKLE 66
++ RG + P WW ++ + P L +A+K+L+ C + CERNWS + IH+ KRNK+
Sbjct: 2895 SLNDRGQMDPKAWWLVHDINAPILQKIALKLLAQPCSSSCCERNWSTYSFIHSLKRNKMT 2954
Query: 67 HKRLEDLVFVKYNQELVRR 85
R E+LVFV N L+ R
Sbjct: 2955 PHRAENLVFVHSNLRLLSR 2973
>Glyma16g19440.1
Length = 354
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 32/39 (82%)
Query: 19 WWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQI 57
WWRM+G TPNL LAIKILSLTC A GCERNWS FEQ+
Sbjct: 225 WWRMFGSQTPNLQKLAIKILSLTCNASGCERNWSEFEQV 263
>Glyma18g24520.1
Length = 252
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 39 SLTCGALGCERNWSVFEQIHTKKRNKLEHKRLEDLVFVKYNQELVRRYNIRDE-LDPISL 97
++ +LGCERNWSVFE IH+KK N EH++L D V+V+YN L RR ++ + DPI++
Sbjct: 142 AIVYCSLGCERNWSVFEHIHSKKINGFEHQKLNDFVYVRYNLRLQRRIWLKKQNYDPINI 201
>Glyma09g27290.1
Length = 275
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 50 NWSVFEQIHTKKRNKLEHKRLEDLVFVKYNQELVRRYNIRDE-LDPISLDDIDE 102
NWSVFE IHTKKRN+LEH+ L DLV+V YN L R + PI + ID
Sbjct: 147 NWSVFEHIHTKKRNRLEHQILNDLVYVTYNLHLKDRSRYKKTCYVPIDYESIDH 200