Miyakogusa Predicted Gene

Lj0g3v0269239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269239.1 Non Chatacterized Hit- tr|K4CH48|K4CH48_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.91,2e-19,UBA-like,UBA-like;
UBA,Ubiquitin-associated/translation elongation factor EF1B,
N-terminal; SUBFAMIL,CUFF.17782.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g39770.1                                                       129   8e-31
Glyma12g22240.1                                                       116   6e-27

>Glyma06g39770.1 
          Length = 789

 Score =  129 bits (324), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/83 (78%), Positives = 72/83 (86%), Gaps = 3/83 (3%)

Query: 1   MNWLLSHMDDPDIDTPIFESHGSETLTNVDQSKVDSLISFGFQEEISRKALKASGGDIDK 60
           MNWLLSHMDDPDID PI + HGSET+  VDQSKVD LISFGF+EEI+R ALKASGGDI+K
Sbjct: 638 MNWLLSHMDDPDIDNPISKGHGSETI--VDQSKVDILISFGFEEEIARNALKASGGDIEK 695

Query: 61  ATYWILSNPDA-VSSMDATSSNA 82
           AT WI +NPDA VSSMDA+ SNA
Sbjct: 696 ATDWIFNNPDASVSSMDASPSNA 718


>Glyma12g22240.1 
          Length = 793

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/87 (71%), Positives = 69/87 (79%), Gaps = 4/87 (4%)

Query: 1   MNWLLSHMDDPDIDTPIFESHGSETLTNVDQSKVDSLISFGFQEEISRKALKASGGDIDK 60
           MNWLLSHMDDPDID PI + HGSET   VDQSKVD LISFGF+EEI+RKALKAS GDI+K
Sbjct: 643 MNWLLSHMDDPDIDNPISKGHGSET---VDQSKVDILISFGFEEEIARKALKASDGDIEK 699

Query: 61  ATYWILSNPDA-VSSMDATSSNAPQFT 86
           AT WI +N DA VSSM+A  S +   T
Sbjct: 700 ATDWIFNNLDASVSSMNAAPSTSASTT 726