Miyakogusa Predicted Gene

Lj0g3v0268989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268989.1 Non Chatacterized Hit- tr|I3SUJ1|I3SUJ1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,L
domain-like,NULL; LRR,Leucine-rich repeat; no description,NULL; U2
SMALL NUCLEAR RIBONUCLEOPROTEIN,CUFF.17777.1
         (280 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g18440.2                                                       486   e-137
Glyma20g18440.1                                                       486   e-137
Glyma10g24350.2                                                       466   e-131
Glyma10g24350.1                                                       466   e-131

>Glyma20g18440.2 
          Length = 287

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/287 (85%), Positives = 261/287 (90%), Gaps = 7/287 (2%)

Query: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTLDLSDNEIVKLENI 60
           MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDT+DLSDNEIVKLEN+
Sbjct: 1   MVRLTADLIWKSPHFFNTIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60

Query: 61  PYLNRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
           PYLNRLGT+LINNNR+TRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKL FLSL
Sbjct: 61  PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120

Query: 121 LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNKERLEAKNLFGSEEAIENAQKTPVKTIS 180
           LDNNITKKPNYRLYVI+ L SLRVLDFKKVKNKERLEAKNLF S+E IE  Q+TP KT S
Sbjct: 121 LDNNITKKPNYRLYVINNLKSLRVLDFKKVKNKERLEAKNLFASKEVIEEIQRTPAKTFS 180

Query: 181 PAETPDVSEATEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLK 240
             ETP+VSEA EEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSG LP DL 
Sbjct: 181 TGETPNVSEAIEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLI 240

Query: 241 SLNGNVTLDNVNEKGEDVVHDE-------SNDTREQKNTDSAAMEQD 280
           SL+ N+ LDNV+EK ED++HD+       SNDT+EQ+NTDSA+MEQD
Sbjct: 241 SLSDNIMLDNVDEKHEDMIHDDRSQADGKSNDTQEQRNTDSASMEQD 287


>Glyma20g18440.1 
          Length = 287

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/287 (85%), Positives = 261/287 (90%), Gaps = 7/287 (2%)

Query: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTLDLSDNEIVKLENI 60
           MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDT+DLSDNEIVKLEN+
Sbjct: 1   MVRLTADLIWKSPHFFNTIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60

Query: 61  PYLNRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
           PYLNRLGT+LINNNR+TRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKL FLSL
Sbjct: 61  PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120

Query: 121 LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNKERLEAKNLFGSEEAIENAQKTPVKTIS 180
           LDNNITKKPNYRLYVI+ L SLRVLDFKKVKNKERLEAKNLF S+E IE  Q+TP KT S
Sbjct: 121 LDNNITKKPNYRLYVINNLKSLRVLDFKKVKNKERLEAKNLFASKEVIEEIQRTPAKTFS 180

Query: 181 PAETPDVSEATEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLK 240
             ETP+VSEA EEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSG LP DL 
Sbjct: 181 TGETPNVSEAIEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLI 240

Query: 241 SLNGNVTLDNVNEKGEDVVHDE-------SNDTREQKNTDSAAMEQD 280
           SL+ N+ LDNV+EK ED++HD+       SNDT+EQ+NTDSA+MEQD
Sbjct: 241 SLSDNIMLDNVDEKHEDMIHDDRSQADGKSNDTQEQRNTDSASMEQD 287


>Glyma10g24350.2 
          Length = 276

 Score =  466 bits (1199), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/287 (83%), Positives = 255/287 (88%), Gaps = 18/287 (6%)

Query: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTLDLSDNEIVKLENI 60
           MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDT+DLSDNEIVKLEN+
Sbjct: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60

Query: 61  PYLNRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
           PYLNRLGT+LINNNR+TRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKL FLSL
Sbjct: 61  PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120

Query: 121 LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNKERLEAKNLFGSEEAIENAQKTPVKTIS 180
           LDNNITKKPNYRLYVI+KL SLRVLDFKKVKNKERLEAKNLF S+E IE  Q+TP K   
Sbjct: 121 LDNNITKKPNYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFSSKEVIEEIQRTPTK--- 177

Query: 181 PAETPDVSEATEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLK 240
            +ETP+VSE  EEQQ PKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSG LP DL 
Sbjct: 178 -SETPNVSEVIEEQQMPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADL- 235

Query: 241 SLNGNVTLDNVNEKGEDVVHD-------ESNDTREQKNTDSAAMEQD 280
                  LDNV+EK ED++HD       ESNDT+EQ+NTDSA+MEQD
Sbjct: 236 ------LLDNVDEKHEDMIHDDRGQADGESNDTQEQRNTDSASMEQD 276


>Glyma10g24350.1 
          Length = 276

 Score =  466 bits (1199), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/287 (83%), Positives = 255/287 (88%), Gaps = 18/287 (6%)

Query: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTLDLSDNEIVKLENI 60
           MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDT+DLSDNEIVKLEN+
Sbjct: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60

Query: 61  PYLNRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
           PYLNRLGT+LINNNR+TRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKL FLSL
Sbjct: 61  PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120

Query: 121 LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNKERLEAKNLFGSEEAIENAQKTPVKTIS 180
           LDNNITKKPNYRLYVI+KL SLRVLDFKKVKNKERLEAKNLF S+E IE  Q+TP K   
Sbjct: 121 LDNNITKKPNYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFSSKEVIEEIQRTPTK--- 177

Query: 181 PAETPDVSEATEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLK 240
            +ETP+VSE  EEQQ PKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSG LP DL 
Sbjct: 178 -SETPNVSEVIEEQQMPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADL- 235

Query: 241 SLNGNVTLDNVNEKGEDVVHD-------ESNDTREQKNTDSAAMEQD 280
                  LDNV+EK ED++HD       ESNDT+EQ+NTDSA+MEQD
Sbjct: 236 ------LLDNVDEKHEDMIHDDRGQADGESNDTQEQRNTDSASMEQD 276