Miyakogusa Predicted Gene
- Lj0g3v0268859.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0268859.2 Non Chatacterized Hit- tr|I1LMP2|I1LMP2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57091 PE,95.79,0,26S
PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7,NULL; EUKARYOTIC
TRANSLATION INITIATION FACTOR 3 SUBU,CUFF.17763.2
(310 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g34980.1 599 e-171
Glyma18g03360.1 595 e-170
Glyma20g03160.1 306 2e-83
Glyma03g07990.1 208 6e-54
Glyma02g42210.1 110 2e-24
Glyma14g06690.1 109 3e-24
Glyma18g03340.1 109 4e-24
Glyma11g35020.1 105 8e-23
Glyma11g35020.2 99 5e-21
Glyma04g12890.1 97 3e-20
Glyma06g47850.1 94 2e-19
>Glyma11g34980.1
Length = 309
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/300 (98%), Positives = 297/300 (99%)
Query: 1 MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
MDVIKTQQISSR IEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS
Sbjct: 1 MDVIKTQQISSRPIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
Query: 61 YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFN 120
YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLD+HGLFN
Sbjct: 61 YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFN 120
Query: 121 DYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGV 180
DYVPNPVLVIIDVEPKELGIPTKAYY VEEVKENATQKSQKVFVHV SEIAAHEVEEIGV
Sbjct: 121 DYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 180
Query: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
Query: 241 VFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
VFNLLPNLNV+DLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK
Sbjct: 241 VFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
>Glyma18g03360.1
Length = 309
Score = 595 bits (1534), Expect = e-170, Method: Compositional matrix adjust.
Identities = 293/300 (97%), Positives = 295/300 (98%)
Query: 1 MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
MDVIKTQQISSR IEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS
Sbjct: 1 MDVIKTQQISSRPIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
Query: 61 YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFN 120
YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLD+HGLFN
Sbjct: 61 YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFN 120
Query: 121 DYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGV 180
YVPNPVLVIIDVEPKELGIPTKAYY VEEVKENATQKSQKVFVHV SEIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 180
Query: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIR YLDLVIDGKLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRGYLDLVIDGKLPLNHEILYHLQD 240
Query: 241 VFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
VFNLLPNLNV+DLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK
Sbjct: 241 VFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
>Glyma20g03160.1
Length = 238
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 165/218 (75%), Gaps = 26/218 (11%)
Query: 62 AVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAK--------EHVVGWYSTGPKLRENDL 113
VPFEEDDKDP+IWFLDHNYHESMFSMFKRIN EHVVGWYSTGPKLREND
Sbjct: 14 TVPFEEDDKDPNIWFLDHNYHESMFSMFKRINGMSRNFFPFLEHVVGWYSTGPKLRENDF 73
Query: 114 DVHGLFNDYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKEN------------------A 155
D HGLFN YVPNPVLVIIDVEPKELGIP K YY VEEVKEN A
Sbjct: 74 DTHGLFNVYVPNPVLVIIDVEPKELGIPRKTYYVVEEVKENSYIPVLAVILQNLFCVHNA 133
Query: 156 TQKSQKVFVHVQSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLTALKGLDARLKE 215
TQKSQKVF+HV SEIA +EVEEI VEHLLR VKDTTIS L T+VSA LT LKGLDARLKE
Sbjct: 134 TQKSQKVFIHVPSEIATNEVEEILVEHLLRYVKDTTISILVTKVSANLTTLKGLDARLKE 193
Query: 216 IRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDL 253
IR + DLVIDGKLPLNHEILYHLQ F+ +NV L
Sbjct: 194 IRGFFDLVIDGKLPLNHEILYHLQVCFSYSCLVNVDYL 231
>Glyma03g07990.1
Length = 263
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/163 (71%), Positives = 127/163 (77%), Gaps = 15/163 (9%)
Query: 137 ELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGVEHLLRDVKDTTISTLA 196
ELGIPTKAYY VEEVKENATQKSQKVFV+V EIAA EV+EI V+HL RDVKDTTISTLA
Sbjct: 53 ELGIPTKAYYVVEEVKENATQKSQKVFVYVPFEIAAREVKEI-VQHLHRDVKDTTISTLA 111
Query: 197 TEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLIKA 256
EVS KLTALKGLDARLKEIR YLDLVIDGKLPLNHEIL V+ +I+
Sbjct: 112 REVSTKLTALKGLDARLKEIRGYLDLVIDGKLPLNHEILLKF-----------VTCIIEY 160
Query: 257 ---FAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERA 296
+KTNDMMLVIYLSSLI+SVIALHNLINNK + R+
Sbjct: 161 HIFLELKTNDMMLVIYLSSLIKSVIALHNLINNKFCHNSFARS 203
>Glyma02g42210.1
Length = 284
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 137/272 (50%), Gaps = 17/272 (6%)
Query: 19 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSF-KGTVDVTNSYAVPFEEDDKDPSIWFL 77
VHPLV+ +I D Y R D +RV+G LLGS GTVDV NSYAVP E + L
Sbjct: 21 VHPLVVFNICDCYVR-RPDQAERVIGTLLGSILPNGTVDVRNSYAVPHSESVDQVA---L 76
Query: 78 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFNDYVPNPVLVIIDVEPKE 137
D Y SM +++N KE +VGWYSTG + +H ++ VPNP+ + +D +
Sbjct: 77 DIEYQHSMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTK 136
Query: 138 LGIPTKAYYTVEEVKENATQKSQKVFVHVQS---EIAAHEVEEIGVEHLLRDVKDTTIST 194
KAY V N + +++ Q ++ E E IG + L K T ++
Sbjct: 137 GACTIKAY-----VSHNLSLGDRQIAAQFQEIPLDLRMVEAERIGFDTL----KATAVNK 187
Query: 195 LATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLI 254
+ +++ ++ L A + +I Y+D V++G++ +++I + D +P L S
Sbjct: 188 IPSDLEGMEASMGHLLALIDDIHKYVDDVVEGRIDPDNKIGRFISDAVGSIPKLPSSAFE 247
Query: 255 KAFAVKTNDMMLVIYLSSLIRSVIALHNLINN 286
K D +L++YLSS+ R+ ++L +N
Sbjct: 248 KLVNDSLQDHLLLLYLSSITRTQLSLAEKLNT 279
>Glyma14g06690.1
Length = 289
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 135/272 (49%), Gaps = 17/272 (6%)
Query: 19 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVTNSYAVPFEEDDKDPSIWFL 77
VHPLV+ +I D Y R D +RV+G LLGS GTVDV NSYAVP E + L
Sbjct: 26 VHPLVVFNICDCYVR-RLDQAERVIGTLLGSILPDGTVDVRNSYAVPHSESVDQVA---L 81
Query: 78 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFNDYVPNPVLVIIDVEPKE 137
D YH SM +++N KE +VGWYSTG + +H ++ VPNP+ + ID +
Sbjct: 82 DIEYHHSMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTIDTGFTK 141
Query: 138 LGIPTKAYYTVEEVKENATQKSQKVFVHVQS---EIAAHEVEEIGVEHLLRDVKDTTIST 194
KAY V N + ++ Q ++ E E IG + L K T +
Sbjct: 142 GAGTIKAY-----VSHNLSLGDHQIAAQFQEIPLDLRMVEAERIGFDTL----KATAVDK 192
Query: 195 LATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLI 254
+ +++ + L A + +I Y+D V++G++ +++I + D +P L S
Sbjct: 193 IPSDLEGMEALMGHLLALIDDIHKYVDDVVEGRIDPDNKIGRFISDAVGSIPKLPSSAFE 252
Query: 255 KAFAVKTNDMMLVIYLSSLIRSVIALHNLINN 286
K D +L++YLSS+ R+ ++L +N
Sbjct: 253 KLVNDSLQDHLLLLYLSSITRTQLSLAEKLNT 284
>Glyma18g03340.1
Length = 289
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 138/271 (50%), Gaps = 17/271 (6%)
Query: 19 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVTNSYAVPFEEDDKDPSIWFL 77
VHPLV+ +I D Y R D RV+G LLGS GTVD+ NSYAVP E + + L
Sbjct: 26 VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNESIEQVA---L 81
Query: 78 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFNDYVPNPVLVIIDVEPKE 137
D YH +M +++N KE +VGWYSTG + +H ++ VPNP+ + +D
Sbjct: 82 DIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTN 141
Query: 138 LGIPTKAYYTVEEVKENATQKSQKVFVHVQS---EIAAHEVEEIGVEHLLRDVKDTTIST 194
KAY V N + +++ Q ++ E E IGV+ L K T +
Sbjct: 142 GAGTIKAY-----VSNNLSLGERQIAAQFQEIPLDLRMVEAERIGVDML----KATAVDK 192
Query: 195 LATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLI 254
+ +++ +++ L + +I Y+D V++G++ +++I + + LP L+ S
Sbjct: 193 IPSDLEGMEASMQHLLVLIDDIYKYVDDVVEGRVAPDNKIGRFISEAVGSLPKLSPSVFD 252
Query: 255 KAFAVKTNDMMLVIYLSSLIRSVIALHNLIN 285
K D +L++YLSS+ R+ ++L +N
Sbjct: 253 KLVNDSLQDHLLLLYLSSITRTQLSLAEKLN 283
>Glyma11g35020.1
Length = 288
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 136/271 (50%), Gaps = 17/271 (6%)
Query: 19 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVTNSYAVPFEEDDKDPSIWFL 77
VHPLV+ +I D Y R D RV+G LLGS GTVD+ NSYAVP E + + L
Sbjct: 25 VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNESIEQVA---L 80
Query: 78 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFNDYVPNPVLVIIDVEPKE 137
D YH +M +++N KE +VGWYSTG + +H ++ VPNP+ + +D
Sbjct: 81 DIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTN 140
Query: 138 LGIPTKAYYTVEEVKENATQKSQKVFVHVQS---EIAAHEVEEIGVEHLLRDVKDTTIST 194
KAY V N + +++ Q ++ E E IG + L K T +
Sbjct: 141 GAGTIKAY-----VSNNLSLGERQIAAQFQEIPLDLRMVEAERIGFDML----KATAVDK 191
Query: 195 LATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLI 254
+ +++ +++ L + +I Y++ V++G + +++I + D LP L+ S
Sbjct: 192 IPSDLEGMEASMQHLLVLIDDIYKYVNDVVEGLVAPDNKIGRFISDAVGSLPKLSPSVFD 251
Query: 255 KAFAVKTNDMMLVIYLSSLIRSVIALHNLIN 285
K D +L++YLSS+ R+ ++L +N
Sbjct: 252 KLVNDSLQDHLLLLYLSSITRTQLSLAEKLN 282
>Glyma11g35020.2
Length = 280
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 25/271 (9%)
Query: 19 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVTNSYAVPFEEDDKDPSIWFL 77
VHPLV+ +I D Y R D RV+G LLGS GTVD+ NSYAVP E + + L
Sbjct: 25 VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNESIEQVA---L 80
Query: 78 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFNDYVPNPVLVIIDVEPKE 137
D YH +M +++N KE +VGWYSTG + +H ++ VPNP+ + +D
Sbjct: 81 DIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTN 140
Query: 138 LGIPTKAYYTVEEVKENATQKSQKVFVHVQS---EIAAHEVEEIGVEHLLRDVKDTTIST 194
KAY V N + +++ Q ++ E E IG + + D++ S
Sbjct: 141 GAGTIKAY-----VSNNLSLGERQIAAQFQEIPLDLRMVEAERIGFDKIPSDLEGMEAS- 194
Query: 195 LATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLI 254
++ L + +I Y++ V++G + +++I + D LP L+ S
Sbjct: 195 -----------MQHLLVLIDDIYKYVNDVVEGLVAPDNKIGRFISDAVGSLPKLSPSVFD 243
Query: 255 KAFAVKTNDMMLVIYLSSLIRSVIALHNLIN 285
K D +L++YLSS+ R+ ++L +N
Sbjct: 244 KLVNDSLQDHLLLLYLSSITRTQLSLAEKLN 274
>Glyma04g12890.1
Length = 318
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 38/296 (12%)
Query: 19 VHPLVLLSIVDNYNRVAKDT-----------------------RKRVVGVLLGSSFKGTV 55
+HPLV+++I D+Y RV RV G ++G TV
Sbjct: 13 LHPLVIVNISDHYTRVKSQMNPTHAPPHNNNNANGGDGVVSPLSPRVYGCVIGVQKGRTV 72
Query: 56 DVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDV 115
++ NS+ + + DPS LD + E ++K++ +++GWYSTG E+D+ +
Sbjct: 73 EIFNSFELLY-----DPSSHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHI 127
Query: 116 HGLFNDYVPNPVLVIID--VEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAH 173
H D +PV V+++ + + +P + + V + Q +FV I
Sbjct: 128 HKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIP---QLIFVRSSYTIETV 184
Query: 174 EVEEIGVEHLLRDVKDTTISTLATEVSAKLT----ALKGLDARLKEIRSYLDLVIDGKLP 229
E E I V+H+ +K + + AT+++A LT A+K L +R+K + YL + G +P
Sbjct: 185 EAERISVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVP 243
Query: 230 LNHEILYHLQDVFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLIN 285
+ +L + + LP + F ++ ND +L+ YL+ L A++ L++
Sbjct: 244 CENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNELVD 299
>Glyma06g47850.1
Length = 322
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%), Gaps = 42/300 (14%)
Query: 19 VHPLVLLSIVDNYNRV---------------------------AKDTRKRVVGVLLGSSF 51
+HPLV+++I D+Y RV + RV G ++G
Sbjct: 13 LHPLVIVNISDHYTRVKSQMNPTHAPPHTTTNNNNANGGDGVVSPPLHPRVYGCVIGVQK 72
Query: 52 KGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLREN 111
TV++ NS+ + + DPS LD + E ++K++ +++GWYSTG E+
Sbjct: 73 GRTVEIFNSFELLY-----DPSTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAEES 127
Query: 112 DLDVHGLFNDYVPNPVLVIID--VEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSE 169
D+ +H D +PV V+++ + + +P + + V + Q +FV
Sbjct: 128 DMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIP---QLIFVRSSYT 184
Query: 170 IAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLT----ALKGLDARLKEIRSYLDLVID 225
I E E I V+H+ +K + + AT+++A LT A+K L +R+K + YL +
Sbjct: 185 IETVEAERISVDHVAH-LKPSDGGSAATQLAAHLTGTHSAIKMLHSRIKVLHHYLLAMQK 243
Query: 226 GKLPLNHEILYHLQDVFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLIN 285
G +P + +L + + LP + F ++ ND +L+ YL+ L +++ L++
Sbjct: 244 GDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTVLISYLAMLTNCSSSMNELVD 303