Miyakogusa Predicted Gene

Lj0g3v0268839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268839.1 Non Chatacterized Hit- tr|H2Y7U4|H2Y7U4_CIOSA
Uncharacterized protein OS=Ciona savignyi GN=Csa.9241
,36.48,1e-17,seg,NULL; coiled-coil,NULL;
Prp19_bind,Micro-fibrillar-associated protein 1, C-terminal; SUBFAMILY
N,CUFF.17759.1
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g11430.1                                                       159   4e-39
Glyma05g28420.1                                                       155   4e-38

>Glyma08g11430.1 
          Length = 440

 Score =  159 bits (401), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/117 (82%), Positives = 99/117 (84%), Gaps = 2/117 (1%)

Query: 1   MSVTAGVSDTVIAVRDKLRGKIGQTKVKRYWPGKVPXXXXXXXXXXXXXXXXXFRPNREA 60
           MSVTAGVSDTVIA+RDKLRGKIGQTKVKRYWPGKVP                  RP+REA
Sbjct: 1   MSVTAGVSDTVIAIRDKLRGKIGQTKVKRYWPGKVPEWADDENEEDAAPAD--IRPSREA 58

Query: 61  ALEEAFPRHEEDAAIVRKDDRRLRRLAESRIDNREEVRADHRRIRQAEIVSTIEEEA 117
           ALE+AFPRHEEDAAIVRKDDRRLRRLAESRIDNREEVRADHRRIRQAEIVSTIEEEA
Sbjct: 59  ALEKAFPRHEEDAAIVRKDDRRLRRLAESRIDNREEVRADHRRIRQAEIVSTIEEEA 115



 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/92 (61%), Positives = 63/92 (68%)

Query: 183 TGVAMVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXXXTKQLVVEEIRKDHE 242
           TGVAMVKPVFVPKSERDTI                           TKQ+VVEEIRKD E
Sbjct: 179 TGVAMVKPVFVPKSERDTIAERERLEAEELAFEEKRKRRLEERRIETKQIVVEEIRKDEE 238

Query: 243 IQRNMELGANIADVDTDDELNEAEEYEAWKVR 274
           IQ+N+E+ ANIADVDTDDE+NEA+EYEAWKVR
Sbjct: 239 IQKNLEMEANIADVDTDDEVNEADEYEAWKVR 270


>Glyma05g28420.1 
          Length = 436

 Score =  155 bits (393), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/117 (80%), Positives = 98/117 (83%), Gaps = 3/117 (2%)

Query: 1   MSVTAGVSDTVIAVRDKLRGKIGQTKVKRYWPGKVPXXXXXXXXXXXXXXXXXFRPNREA 60
           MSVTAGVSDTVIAVRDKLRGKIGQTKVKRYWPGKVP                  RP+REA
Sbjct: 1   MSVTAGVSDTVIAVRDKLRGKIGQTKVKRYWPGKVPEWADDENEDAAPAD---IRPSREA 57

Query: 61  ALEEAFPRHEEDAAIVRKDDRRLRRLAESRIDNREEVRADHRRIRQAEIVSTIEEEA 117
           ALE+AFPRH+ED AIVRKDDRRLRRLA+SRIDNREEVRADHRRIRQAEIVSTIEEEA
Sbjct: 58  ALEKAFPRHQEDTAIVRKDDRRLRRLAQSRIDNREEVRADHRRIRQAEIVSTIEEEA 114



 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/92 (63%), Positives = 63/92 (68%)

Query: 183 TGVAMVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXXXTKQLVVEEIRKDHE 242
           TGVAMVKPVFVPKSERDTI                           TKQ+VVEEIRKD E
Sbjct: 178 TGVAMVKPVFVPKSERDTIAERERLEAEELALEDKRKRRLEERRIETKQIVVEEIRKDEE 237

Query: 243 IQRNMELGANIADVDTDDELNEAEEYEAWKVR 274
           IQ+N+E+ ANIADVDTDDE+NEAEEYEAWKVR
Sbjct: 238 IQKNLEMEANIADVDTDDEVNEAEEYEAWKVR 269