Miyakogusa Predicted Gene

Lj0g3v0268649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268649.1 tr|B9HAE3|B9HAE3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561276 PE=4
SV=1,46.53,2e-18,seg,NULL,CUFF.17748.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g24130.1                                                       137   3e-33
Glyma13g22540.1                                                       135   1e-32
Glyma17g11340.1                                                       135   2e-32
Glyma09g12860.1                                                       129   1e-30
Glyma17g09910.1                                                        60   6e-10
Glyma05g02010.1                                                        57   6e-09
Glyma06g19600.1                                                        54   5e-08
Glyma04g35180.1                                                        52   2e-07

>Glyma15g24130.1 
          Length = 140

 Score =  137 bits (346), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 84/112 (75%), Gaps = 9/112 (8%)

Query: 33  FKGFNLKWWQSHEEEGKRLIDQNGGGGEGWMVEKMKKVKEASEVIAGPKWKNFIRKISG- 91
           F+GF L W +SHEE GK L++Q G     W+  K++K+KE SEVIAGPKWK FIRKISG 
Sbjct: 33  FQGFGLSWCRSHEE-GKGLVEQKGNS---WLSCKLRKIKEFSEVIAGPKWKTFIRKISGY 88

Query: 92  ---QQKKKRFQYDEQSYALNFNSRAESEDDEDMPPRFSARFSAPFPAGRRQN 140
              QQ+K RFQYDE SYALNFNS  +SEDD D PP FSARFSAPFP+ RRQ 
Sbjct: 89  GRKQQQKNRFQYDEHSYALNFNSGDKSEDD-DTPPSFSARFSAPFPSARRQT 139


>Glyma13g22540.1 
          Length = 141

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 90/143 (62%), Gaps = 10/143 (6%)

Query: 3   ASYERKPLVMXXXXXXXXXXAXXXXXXXXXFKGFNLKWWQSHEEEGKRLIDQNGGGGEGW 62
           ASYE  PLVM                      G   KWWQ HEEEGK L+    G GE W
Sbjct: 2   ASYEGGPLVMEMEGEEGFEEEAGSSGCGCGCFGLK-KWWQGHEEEGKGLLVDQKGEGESW 60

Query: 63  MVEKMKKVKEASEVIAGPKWKNFIRKISG-----QQKKKRFQYDEQSYALNFNSRAESED 117
           +VEK++K KE SEVIAGPKWK FIRKISG     +Q++ RFQYDE SYALNFNS A+SE 
Sbjct: 61  VVEKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKQQRNRFQYDEHSYALNFNSGAQSE- 119

Query: 118 DEDMPPRFSARFSAPFPAGRRQN 140
           DE MP  FS+RF+AP   GRRQN
Sbjct: 120 DEGMPHSFSSRFAAP---GRRQN 139


>Glyma17g11340.1 
          Length = 140

 Score =  135 bits (339), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/144 (57%), Positives = 94/144 (65%), Gaps = 13/144 (9%)

Query: 3   ASYERKPLVMXXXXXXXXXXAXXXXXXXXXFKGFNLK-WWQSHEEEGKRLIDQNGGGGEG 61
           ASYE +PLVM          A         F+ F+LK WWQ +EEEGK L+DQ G G E 
Sbjct: 2   ASYEGRPLVMEMEGEEGFEEAGSSGCGC--FRCFSLKKWWQGYEEEGKGLLDQKGEG-ES 58

Query: 62  WMVEKMKKVKEASEVIAGPKWKNFIRKISGQQKK-----KRFQYDEQSYALNFNSRAESE 116
           W+V K++K KE SEVIAGPKWK FIRKISG  KK      RFQYDE SYALNFNS A+ E
Sbjct: 59  WVVNKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKYQRNRFQYDEHSYALNFNSEAQRE 118

Query: 117 DDEDMPPRFSARFSAPFPAGRRQN 140
            DE MP  FS+RF+AP   GRRQN
Sbjct: 119 -DEGMPHSFSSRFAAP---GRRQN 138


>Glyma09g12860.1 
          Length = 144

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/114 (62%), Positives = 82/114 (71%), Gaps = 10/114 (8%)

Query: 33  FKGFNLKWWQSH-EEEGKRLIDQNGGGGEGWMVEKMKKVKEASEVIAGPKWKNFIRKISG 91
           F+GF   W      EEGK L++Q G   +  +  K++K+KE SEVIAGPKWK FIRKISG
Sbjct: 33  FRGFGWSWCSRRGSEEGKGLVEQKG---DSRLSYKLRKIKEFSEVIAGPKWKTFIRKISG 89

Query: 92  -----QQKKKRFQYDEQSYALNFNSRAESEDDEDMPPRFSARFSAPFPAGRRQN 140
                QQ+K RFQYDE SYALNFNS A+SEDD DMPP FSARFSAPFP+ RRQ 
Sbjct: 90  YGRKQQQQKNRFQYDEHSYALNFNSGAQSEDD-DMPPSFSARFSAPFPSTRRQT 142


>Glyma17g09910.1 
          Length = 159

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 18/104 (17%)

Query: 40  WWQ---SHEEEGKRLIDQNGGGGEGWM---VEKMKKVKEASEVIAGPKWKNFIRKISGQQ 93
           WW+   SH              G+ W    +  +KK++E SE++AGPKWK FIR+ +  +
Sbjct: 42  WWERVRSHSHSTP------ASTGDRWWSRGLRALKKLREWSEIVAGPKWKTFIRRFNRNR 95

Query: 94  KKKR---FQYDEQSYALNFN--SRAESEDDEDMPPR-FSARFSA 131
             KR   +QYD  SYALNF+     +  DD+D   R FS R++A
Sbjct: 96  PNKRIPTYQYDPFSYALNFDEGPNGDFNDDDDAALRNFSTRYAA 139


>Glyma05g02010.1 
          Length = 114

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 56  GGGGEGWM---VEKMKKVKEASEVIAGPKWKNFIRKISGQQKKKR---FQYDEQSYALNF 109
              G+ W    +  +KK++E SE++AGPKWK FIR+ +  +  KR   +QYD  SYALNF
Sbjct: 17  ASAGDRWWSRGLRALKKLREWSEIVAGPKWKTFIRRFNRNRPNKRIPTYQYDPFSYALNF 76

Query: 110 ----NSRAESEDDEDMPPRFSARFSA 131
               N       D+     FS R++A
Sbjct: 77  DEGPNGDFNHHHDDAALRNFSTRYAA 102


>Glyma06g19600.1 
          Length = 179

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 64  VEKMKKVKEASEVIAGPKWKNFIRKIS------GQQKKKRFQYDEQSYALNFNSRAESE- 116
           V    KV+E SE+ AGP+WK FIR+ S       +    ++QYD  SY+LNF+       
Sbjct: 84  VRAFMKVREWSELAAGPRWKTFIRRFSRSRSGWARHAAGKYQYDPLSYSLNFDEGHNGYF 143

Query: 117 --DDEDMPPRFSARFSAPFP 134
             D  D    FSAR++AP P
Sbjct: 144 DGDGYDGLRNFSARYAAPPP 163


>Glyma04g35180.1 
          Length = 178

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 11/88 (12%)

Query: 58  GGEGWM--VEKMKKVKEASEVIAGPKWKNFIRKIS------GQQKKKRFQYDEQSYALNF 109
           GG  W   V    KV+E SE+ AGP+WK FIR+ S       +    ++QYD  SYALNF
Sbjct: 75  GGRWWSGGVRAFMKVREWSELAAGPRWKTFIRRFSRSRSGGSRHAAGKYQYDPLSYALNF 134

Query: 110 N---SRAESEDDEDMPPRFSARFSAPFP 134
           +   +    +D  D    FS R++AP P
Sbjct: 135 DEGHNGDFGDDGYDGLRNFSTRYAAPPP 162