Miyakogusa Predicted Gene

Lj0g3v0268509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268509.1 tr|D8LCX0|D8LCX0_ECTSI Nucleotidyltransferase
OS=Ectocarpus siliculosus GN=Esi_0111_0086 PE=4
SV=1,40,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,gene.g20820.t1.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g25550.1                                                       305   2e-83
Glyma20g25550.2                                                       305   2e-83
Glyma20g25550.3                                                       305   2e-83
Glyma10g41660.1                                                       102   4e-22

>Glyma20g25550.1 
          Length = 407

 Score =  305 bits (782), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 143/176 (81%), Positives = 158/176 (89%)

Query: 5   KTEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALK 64
           + + +G LLS+PGASNTVLE +VPYS+MS+IQL GKIPSQFC QQTAEDMAL+AYNRALK
Sbjct: 53  RYQVVGSLLSVPGASNTVLEVVVPYSKMSLIQLLGKIPSQFCGQQTAEDMALLAYNRALK 112

Query: 65  LSKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKIS 124
           LSKPGSP VGVGFTGSLASSRPK GEHRFYMSTRTAD+LWIS VTL KGLR+REEED++S
Sbjct: 113 LSKPGSPAVGVGFTGSLASSRPKLGEHRFYMSTRTADQLWISSVTLTKGLRTREEEDRVS 172

Query: 125 SHLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
           SHLL+KAI NACKVP  S   LSESDVSDE E QFNEDQ+LEQLINGQIC+KIYPF
Sbjct: 173 SHLLIKAIGNACKVPGASVLLLSESDVSDECETQFNEDQQLEQLINGQICFKIYPF 228


>Glyma20g25550.2 
          Length = 382

 Score =  305 bits (781), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 143/175 (81%), Positives = 158/175 (90%)

Query: 6   TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
           ++ +G LLS+PGASNTVLE +VPYS+MS+IQL GKIPSQFC QQTAEDMAL+AYNRALKL
Sbjct: 29  SQVVGSLLSVPGASNTVLEVVVPYSKMSLIQLLGKIPSQFCGQQTAEDMALLAYNRALKL 88

Query: 66  SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
           SKPGSP VGVGFTGSLASSRPK GEHRFYMSTRTAD+LWIS VTL KGLR+REEED++SS
Sbjct: 89  SKPGSPAVGVGFTGSLASSRPKLGEHRFYMSTRTADQLWISSVTLTKGLRTREEEDRVSS 148

Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
           HLL+KAI NACKVP  S   LSESDVSDE E QFNEDQ+LEQLINGQIC+KIYPF
Sbjct: 149 HLLIKAIGNACKVPGASVLLLSESDVSDECETQFNEDQQLEQLINGQICFKIYPF 203


>Glyma20g25550.3 
          Length = 314

 Score =  305 bits (780), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 143/175 (81%), Positives = 158/175 (90%)

Query: 6   TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
           ++ +G LLS+PGASNTVLE +VPYS+MS+IQL GKIPSQFC QQTAEDMAL+AYNRALKL
Sbjct: 29  SQVVGSLLSVPGASNTVLEVVVPYSKMSLIQLLGKIPSQFCGQQTAEDMALLAYNRALKL 88

Query: 66  SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
           SKPGSP VGVGFTGSLASSRPK GEHRFYMSTRTAD+LWIS VTL KGLR+REEED++SS
Sbjct: 89  SKPGSPAVGVGFTGSLASSRPKLGEHRFYMSTRTADQLWISSVTLTKGLRTREEEDRVSS 148

Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
           HLL+KAI NACKVP  S   LSESDVSDE E QFNEDQ+LEQLINGQIC+KIYPF
Sbjct: 149 HLLIKAIGNACKVPGASVLLLSESDVSDECETQFNEDQQLEQLINGQICFKIYPF 203


>Glyma10g41660.1 
          Length = 272

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 64/100 (64%), Gaps = 17/100 (17%)

Query: 81  LASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISSHLLLKAIANACKVPA 140
           L    P     RFYMS RTAD+LWIS VTL KGLR+REEE ++SSHLL+K          
Sbjct: 16  LGYHLPSPDPTRFYMSIRTADQLWISSVTLTKGLRTREEEGRVSSHLLIKF--------- 66

Query: 141 TSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
                  +  + DE E QFN+DQ+LE LINGQIC+KIYPF
Sbjct: 67  -------QQHLFDECEIQFNKDQQLE-LINGQICFKIYPF 98