Miyakogusa Predicted Gene

Lj0g3v0268489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268489.1 Non Chatacterized Hit- tr|I1M638|I1M638_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82.57,0,NIEMANN-PICK C1,NULL; PATCHED-RELATED,NULL;
seg,NULL,NODE_19512_length_4214_cov_79.163979.path2.1
         (574 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g00400.1                                                       879   0.0  
Glyma02g48070.1                                                       825   0.0  
Glyma06g02020.1                                                       692   0.0  
Glyma04g01900.1                                                       263   4e-70
Glyma05g17420.1                                                        56   1e-07
Glyma18g36020.1                                                        55   2e-07

>Glyma14g00400.1 
          Length = 680

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/568 (76%), Positives = 468/568 (82%), Gaps = 31/568 (5%)

Query: 37  HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQ--- 93
           HS EYCAMYDICGQ SDGK LNCPY SPSVKP DLLSAKIQSLCPTITGNVCCT +Q   
Sbjct: 3   HSEEYCAMYDICGQSSDGKALNCPYGSPSVKPDDLLSAKIQSLCPTITGNVCCTADQFDT 62

Query: 94  --LQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYVTET 151
             +QAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSIS+V+GNMTVDGID Y+TET
Sbjct: 63  LRVQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISEVNGNMTVDGIDYYITET 122

Query: 152 FGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFKTTI 211
           FGEGLY +CKDVKFGTMNTRAIDFVGAGA+N+KEWFAFLGQKVPPGFPGSPYSI FKTTI
Sbjct: 123 FGEGLYESCKDVKFGTMNTRAIDFVGAGASNFKEWFAFLGQKVPPGFPGSPYSILFKTTI 182

Query: 212 LDSSPMELMNASVYSCNDTSLGXXXXXXXXXXXXXXXXXXXXXXXXXXIKMGSLKVRCVD 271
           LDSSPM+LMNASVYSCNDTSLG                          I++GSLKVRCVD
Sbjct: 183 LDSSPMKLMNASVYSCNDTSLGCSCGDCPSSPVCSGSEPSPPRKDPCSIRIGSLKVRCVD 242

Query: 272 LSLAVLYIVLVFVLFGWIXXXXXXXXXXXGSSAEPLL---VSEGRSFTNLPKDG------ 322
            S+A+LYIVLVFVLFGW            GS  EPLL   V EG SF NL KDG      
Sbjct: 243 FSMAILYIVLVFVLFGWALLQRTRGRRRLGSGVEPLLDDMVDEGSSFANLQKDGTHPAEG 302

Query: 323 --EVLVIDPQ---------------RQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCS 365
                +++ +                QN VQ+SF+Q  LS+FYR YGRWA R+PTIVLCS
Sbjct: 303 LGSYFLLNKKFIEDLGVLGNTVYTCWQNVVQFSFVQGCLSSFYRTYGRWATRKPTIVLCS 362

Query: 366 SLAIVILLCFGLLRFNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPES 425
           SL IV+LLC GLLRF VETRPEKLWVGP SKAAEEKEFFDSHLAPFYRIEQLIIAT+PES
Sbjct: 363 SLTIVVLLCLGLLRFEVETRPEKLWVGPGSKAAEEKEFFDSHLAPFYRIEQLIIATIPES 422

Query: 426 EHGKPPSIVTDDNIELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQ 485
           +HGKPPSI+T++NIELLFEIQEKVD IRANYSGLLVSLSDICLKPLG+DCA+QSILQYFQ
Sbjct: 423 KHGKPPSIITEENIELLFEIQEKVDGIRANYSGLLVSLSDICLKPLGDDCASQSILQYFQ 482

Query: 486 MDPDNFDNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITY 545
           MDPDN+DNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAF+ITY
Sbjct: 483 MDPDNYDNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFVITY 542

Query: 546 PVNNALTKVGDENGKAIAWEKAFIQLAK 573
           PVNNA+TKVGDENGKAIAWEKAFIQLAK
Sbjct: 543 PVNNAITKVGDENGKAIAWEKAFIQLAK 570


>Glyma02g48070.1 
          Length = 1194

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/538 (76%), Positives = 438/538 (81%), Gaps = 37/538 (6%)

Query: 44  MYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQ-----LQAVP 98
           MYDICGQRSDGK LNCPY SPSVKP DLLSAKIQSLCPTITGNVCCT +Q     +QAVP
Sbjct: 1   MYDICGQRSDGKALNCPYGSPSVKPDDLLSAKIQSLCPTITGNVCCTADQFDTLRVQAVP 60

Query: 99  ILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYVTETFGEGLYS 158
           ILVGCPACLRNFLNLFCELSCSPNQSLFINVTSIS+VDGN TVDGID ++TETFG+GLY 
Sbjct: 61  ILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISEVDGNTTVDGIDYHLTETFGQGLYE 120

Query: 159 ACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFKTTILDSSPME 218
           +CKDVKFGTMNTRAIDFVGAGA+N+KEW  FLGQKVPPGFPGSPYSI FKT ILDSSPM+
Sbjct: 121 SCKDVKFGTMNTRAIDFVGAGASNFKEWAEFLGQKVPPGFPGSPYSILFKTAILDSSPMK 180

Query: 219 LMNASVYSCNDTSLGXXXXXXXXXXXXXXXXXXXXXXXXXXIKMGSLKVRCVDLSLAVLY 278
           LMNASVYSCNDTSLG                          I +GSLKVRCVD S+A+LY
Sbjct: 181 LMNASVYSCNDTSLGCSCGDCPSSPVCSGSEPSPPRKDPCSIGIGSLKVRCVDFSIAILY 240

Query: 279 IVLVFVLFGWIXXXXXXXXXXXGSSAEPLL---VSEGRSFTNLPKDGEVLVIDPQRQNEV 335
           IVLVFVLFGW            GSSAEPLL   V EG +                     
Sbjct: 241 IVLVFVLFGWALLQRTRGRRRLGSSAEPLLDDMVGEGMA--------------------- 279

Query: 336 QYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLRFNVETRPEKLWVGPES 395
                   L+   R YGRWAAR+PTIVLCSSLAIV+LLC GLLRF VETRPEKLWVGP S
Sbjct: 280 --------LAVLARTYGRWAARKPTIVLCSSLAIVVLLCLGLLRFEVETRPEKLWVGPGS 331

Query: 396 KAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNIELLFEIQEKVDEIRAN 455
           KAAEEKEFFDSHLAPFYRIEQLIIAT+PES+HGKPPSI+T++NIELLFEIQEKVD IRAN
Sbjct: 332 KAAEEKEFFDSHLAPFYRIEQLIIATIPESKHGKPPSIITEENIELLFEIQEKVDGIRAN 391

Query: 456 YSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEHAEYCFQHYTSTETCFS 515
           YSG LVSLSDICLKPLG+DCATQSILQYFQMDPDN+DNYGGVEHAEYCFQHYTSTETCFS
Sbjct: 392 YSGFLVSLSDICLKPLGDDCATQSILQYFQMDPDNYDNYGGVEHAEYCFQHYTSTETCFS 451

Query: 516 AFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENGKAIAWEKAFIQLAK 573
           AFKAPLEPTTALGGFSGNNYSEASAF+ITYPVNNA+TKVG ENGKAIAWEKAFIQLAK
Sbjct: 452 AFKAPLEPTTALGGFSGNNYSEASAFVITYPVNNAITKVGGENGKAIAWEKAFIQLAK 509


>Glyma06g02020.1 
          Length = 1292

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/554 (59%), Positives = 408/554 (73%), Gaps = 17/554 (3%)

Query: 37  HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQL-- 94
           HS +YCAMYDICG RSDGKV+NCP+ SP+VKP DLLS+KIQSLCPTITGNVCCTE Q   
Sbjct: 45  HSEDYCAMYDICGTRSDGKVVNCPHGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFET 104

Query: 95  ------QAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 148
                 QA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVTS+  V GN TV GID +V
Sbjct: 105 LRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVSGNSTVGGIDYFV 164

Query: 149 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 208
           T+ FGEGLY +CK+VKFGTMN+RA+ F+GAGA N+K+WFAF+G+K  P   GSPY+I F+
Sbjct: 165 TDAFGEGLYESCKEVKFGTMNSRALQFIGAGAQNFKDWFAFIGRKAAPHGLGSPYAITFR 224

Query: 209 TTILDSSPMELMNASVYSCNDTSLGXXXXXX-XXXXXXXXXXXXXXXXXXXXIKMGSLKV 267
               +SS M+ MN S YSC D SLG                           +K+G+L V
Sbjct: 225 PNATESSDMKPMNVSTYSCGDISLGCSCGDCPSSSVCSSSASTTTNKKDSCSVKIGTLMV 284

Query: 268 RCVDLSLAVLYIVLVFVLFGW-IXXXXXXXXXXXGSSAEPLLVSEGRSFT-------NLP 319
           +CVDL LAVLY++L+ V  GW +            + +   ++S+G  ++       N+P
Sbjct: 285 KCVDLILAVLYVILICVFLGWGLYHRIRERKPTYRTKSMSNVISDGALYSHSREKDENVP 344

Query: 320 KDGEVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLR 379
               ++    Q +N V+ S +Q +++NFYR YG + AR P +VL SSLAIV+LLC GL++
Sbjct: 345 MQIHMMEDAQQNRNRVRLSAVQGYMTNFYRKYGSYVARHPIMVLASSLAIVLLLCLGLIQ 404

Query: 380 FNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNI 439
           F VETRPEKLWVGP SKAA+EK+FFD+HLAPFYRIEQLI+AT+P++ +   P IVT+DNI
Sbjct: 405 FKVETRPEKLWVGPGSKAAQEKQFFDTHLAPFYRIEQLILATVPDNVNSTSPRIVTEDNI 464

Query: 440 ELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEH 499
             LFEIQ+KVD IRANYSGL VSL DIC+KPL +DCATQS+LQYF+MDP NFD+YGGVEH
Sbjct: 465 RFLFEIQKKVDAIRANYSGLTVSLQDICMKPLDKDCATQSVLQYFKMDPKNFDDYGGVEH 524

Query: 500 AEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENG 559
             YCF+HY+S + C SAFKAPL+P+T LGGFSGN+YSEASAFI+TYPVNNA+ K G+   
Sbjct: 525 LNYCFEHYSSADRCMSAFKAPLDPSTVLGGFSGNDYSEASAFIVTYPVNNAINKEGNGTR 584

Query: 560 KAIAWEKAFIQLAK 573
           KA+AWEK FIQL K
Sbjct: 585 KAVAWEKTFIQLVK 598


>Glyma04g01900.1 
          Length = 772

 Score =  263 bits (672), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 129/223 (57%), Positives = 160/223 (71%), Gaps = 26/223 (11%)

Query: 351 YGRWAARRPTIVLCSSLAIVILLCFGLLRFNVETRPEKLWVGPESKAAEEKEFFDSHLAP 410
           Y R   R+PT     + ++  ++  GL+RF VETRPEKLWVGP SKAA+EK+FFD+HLAP
Sbjct: 125 YHRIRERKPTY---RTKSVSNVISDGLIRFKVETRPEKLWVGPGSKAAQEKQFFDTHLAP 181

Query: 411 FYRIEQLIIATLPESEHGKPPSIVTDDNIELLFEIQEKVDEIRANYSGLLVSLSDICLKP 470
           FYRIEQLI+AT+P+  +     IV++DNI  LFEIQ+KVD IRANYSGL VSL DIC+KP
Sbjct: 182 FYRIEQLILATVPDHVNSTSTRIVSEDNIRFLFEIQKKVDAIRANYSGLTVSLQDICMKP 241

Query: 471 LGEDCATQSILQYFQMDPDNFDNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGF 530
           L +DCATQS+L                       QHY+S + C SAFKAPL+P+T LGGF
Sbjct: 242 LDKDCATQSVL-----------------------QHYSSADHCMSAFKAPLDPSTVLGGF 278

Query: 531 SGNNYSEASAFIITYPVNNALTKVGDENGKAIAWEKAFIQLAK 573
           SGN+YSEASAFI+TYP+NNA+ + G+   KA+AWEK FIQL K
Sbjct: 279 SGNDYSEASAFIVTYPINNAINEEGNGTRKAVAWEKTFIQLVK 321



 Score =  110 bits (274), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 168 MNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFKTTILDSSPMELMNASVYSC 227
           MN+RA+ F+GAGA NYK+WF+F+G+K  P   GSPY+I F      SS M+ MN S YSC
Sbjct: 1   MNSRALQFIGAGAQNYKDWFSFIGRKAAPHGLGSPYAITFWPNATASSDMKPMNVSTYSC 60

Query: 228 NDTSLG-XXXXXXXXXXXXXXXXXXXXXXXXXXIKMGSLKVRCVDLSLAVLYIVLVFVLF 286
            D SLG                           +K+G+L V+CVDLSLAVLYI+L+ V  
Sbjct: 61  GDISLGCSCGDCPSSSVCSNSASTTTNKKDSCSVKVGTLMVKCVDLSLAVLYIILICVFL 120

Query: 287 GW-IXXXXXXXXXXXGSSAEPLLVSEGRSFTNLPKDGEVLVIDPQRQNEVQYSFIQEWLS 345
           GW +            + +   ++S+G     +    E L + P  +   +  F    L+
Sbjct: 121 GWGLYHRIRERKPTYRTKSVSNVISDGLIRFKVETRPEKLWVGPGSKAAQEKQFFDTHLA 180

Query: 346 NFYRAYGRWAARRPTIVLCSSLAIV 370
            FYR      A  P  V  +S  IV
Sbjct: 181 PFYRIEQLILATVPDHVNSTSTRIV 205


>Glyma05g17420.1 
          Length = 185

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/39 (64%), Positives = 30/39 (76%)

Query: 351 YGRWAARRPTIVLCSSLAIVILLCFGLLRFNVETRPEKL 389
           YG +  R P +VL SSLAIV+LL  GL+RF VETRPEK+
Sbjct: 57  YGSYVVRHPIMVLASSLAIVLLLYLGLIRFKVETRPEKV 95


>Glyma18g36020.1 
          Length = 135

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 537 EASAFIITYPVNNALTKVGDENGKAIAWEKAFIQLAK 573
           +ASAFI+TYP+NNA+ + G+   KA+AWEK FIQL K
Sbjct: 1   QASAFIVTYPLNNAINEEGNGTRKAVAWEKTFIQLVK 37