Miyakogusa Predicted Gene

Lj0g3v0268109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268109.1 Non Chatacterized Hit- tr|F6H200|F6H200_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.4,0.00000000003,seg,NULL,CUFF.17700.1
         (241 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35590.1                                                       174   6e-44
Glyma13g34840.1                                                       162   3e-40

>Glyma12g35590.1 
          Length = 331

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 134/246 (54%), Gaps = 59/246 (23%)

Query: 1   MEPNDNXXXXXXXXRDEKVEALDLL-EECWYFDNMLNIRPTIPRCHSDPSPSYGLICPDF 59
           MEP  N        +DEKVEA DLL EECW+FDN+L I P + RCHSDP PS        
Sbjct: 1   MEPIGNSCESSFY-KDEKVEAADLLLEECWFFDNLLKIAPRMTRCHSDPYPS-------- 51

Query: 60  LGXXXXXXXXXXXXXXXXXXGSVPPKKIQRAPSMPPLRVKEEDKSGMDFTR--GKLMHQX 117
                               G + P         P   VK+ + S        G ++H  
Sbjct: 52  ------------------STGLISP---------PDFLVKDSNSSSPSKPPNNGAIVHS- 83

Query: 118 XXXXXXXXXXXXXPKRIQRAPSMPPLLVRDEDEKKG----RKLVHQSLDTEVVQAASKPQ 173
                         K+IQRAPSMPPL +R+ED K       KLVHQ  D  V  AAS+P 
Sbjct: 84  --------------KKIQRAPSMPPLRLREEDHKGSCSVRSKLVHQPTDPVVSHAASEPH 129

Query: 174 SAKMKGHHKSDCNKRKSKLLRTPSLPSSIGRDEKFQVNGPPRTGRSPKQPSTPTTVDNLP 233
            A+MKGHH SDCN+RKSKLLRTPSLP SIGR+EKFQVN   RTGRS KQPSTPT +D LP
Sbjct: 130 CAQMKGHHNSDCNRRKSKLLRTPSLPPSIGREEKFQVND-TRTGRSHKQPSTPTHIDILP 188

Query: 234 PRQPSK 239
           PRQ SK
Sbjct: 189 PRQTSK 194


>Glyma13g34840.1 
          Length = 334

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 127/244 (52%), Gaps = 52/244 (21%)

Query: 1   MEPNDNXXXXXXXXRDEKVEALDLL-EECWYFDNMLNIRPTIPRCHSDPSP-SYGLIC-P 57
           MEP  N        +DEKVEA DLL EECW+FDN+L I P + RCHS+P P S GLI  P
Sbjct: 1   MEPIGNSYESSFS-KDEKVEAADLLLEECWFFDNLLKITPRMTRCHSEPYPSSTGLISPP 59

Query: 58  DFLGXXXXXXXXXXXXXXXXXXGSVPPKKIQRAPSMPPLRVK--EEDKSGMDFTRGKLMH 115
           DFL                   G++   KIQRAP MPPLR++  EED+ G   TR KL+H
Sbjct: 60  DFL--VKDSNSNSSSPSKPLNNGAIVHPKIQRAPYMPPLRLREEEEDQKGSSSTRSKLVH 117

Query: 116 QXXXXXXXXXXXXXXPKRIQRAPSMPPLLVRDEDEKKGRKLVHQSLDTEVVQAASKPQSA 175
           Q                                             D  V  AASKP  A
Sbjct: 118 QPT-------------------------------------------DPVVSHAASKPHCA 134

Query: 176 KMKGHHKSDCNKRKSKLLRTPSLPSSIGRDEKFQVNGPPRTGRSPKQPSTPTTVDNLPPR 235
           +MKG H SDC +RKSKLLRTPSLP SIGRDEK QV    R GR  KQPSTPT +D LPPR
Sbjct: 135 QMKGRHNSDCVRRKSKLLRTPSLPPSIGRDEKLQVYD-TRPGRFHKQPSTPTQIDILPPR 193

Query: 236 QPSK 239
           Q SK
Sbjct: 194 QTSK 197