Miyakogusa Predicted Gene

Lj0g3v0267149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0267149.1 Non Chatacterized Hit- tr|I3STL3|I3STL3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,87.5,0.000000000000003, ,CUFF.17630.1
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g01290.1                                                        80   6e-16
Glyma07g29400.1                                                        77   3e-15
Glyma07g29410.1                                                        76   7e-15
Glyma07g29430.1                                                        56   8e-09

>Glyma20g01290.1 
          Length = 176

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 45/53 (84%), Gaps = 1/53 (1%)

Query: 1  MAVKFAQGLIMMLVITVSMFAVSMANKEWSSGFNYTDWWSRFGNHNYNNKTEQ 53
          M +KF  G+++++VI+ SMF+VSMANK+WS GFNYTDWWSRFGNH   NKT+Q
Sbjct: 1  MGLKFTHGVVILIVISASMFSVSMANKDWSFGFNYTDWWSRFGNHP-QNKTQQ 52


>Glyma07g29400.1 
          Length = 176

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 45/53 (84%), Gaps = 1/53 (1%)

Query: 1  MAVKFAQGLIMMLVITVSMFAVSMANKEWSSGFNYTDWWSRFGNHNYNNKTEQ 53
          MA+K   G++++++I+ SMF+VSMANK+WS GFNYTDWWSRFGNH   NKT+Q
Sbjct: 1  MALKLGHGVMILVIISASMFSVSMANKDWSFGFNYTDWWSRFGNHP-QNKTQQ 52


>Glyma07g29410.1 
          Length = 176

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)

Query: 1  MAVKFAQGLIMMLVITVSMFAVSMANKEWSSGFNYTDWWSRFGNHNYNNKTEQ 53
          M  KF  G++++ VI+ SMF++SMANK+WS GFNYTDWWSRFGNH   NKT+Q
Sbjct: 1  MGAKFGHGVMILFVISASMFSMSMANKDWSFGFNYTDWWSRFGNHA-QNKTQQ 52


>Glyma07g29430.1 
          Length = 160

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 32/39 (82%)

Query: 1  MAVKFAQGLIMMLVITVSMFAVSMANKEWSSGFNYTDWW 39
          M VKF   +++++VI+ SMF+VSMAN +WS GFNYTDWW
Sbjct: 1  MGVKFRHVVMILVVISASMFSVSMANTDWSFGFNYTDWW 39