Miyakogusa Predicted Gene

Lj0g3v0266449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266449.1 tr|Q53LP8|Q53LP8_ORYSJ Seed protein B32E OS=Oryza
sativa subsp. japonica GN=LOC_Os11g09320 PE=4
SV=1,40.78,0.000000000000003,seg,NULL,CUFF.17594.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g09390.1                                                       161   2e-40
Glyma04g42250.1                                                       136   8e-33
Glyma06g12570.1                                                       135   1e-32

>Glyma13g09390.1 
          Length = 508

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 1   MVDYLSGDAYETEVSYDNSEPTPYAVPLHSDXXXXXXXXXXXXXXXXXXXMNTSTPGFSK 60
           M+DYLSGDAY+TE S++ SEPT YAVPLHS                       S    SK
Sbjct: 341 MIDYLSGDAYKTEASHEQSEPTSYAVPLHSSPTNPASTAATLSSSPPYSPSTPSRI-LSK 399

Query: 61  QPIYDEPSPVNKSSESLSPAPGDTQSPGILPPPPARFNQRQNFFEEQGMXXXXXXXXXXX 120
           QP+YDEP P+NKSSESL  +P +TQSPG L PPP+ +NQRQ FFE+QG+           
Sbjct: 400 QPVYDEPPPINKSSESLPLSPLETQSPGFLLPPPSSYNQRQQFFEQQGVPHSSSGFSSAD 459

Query: 121 XXLLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 155
             LL QTQNLSLNSSTPTKQEK ED LFKDL+DFA
Sbjct: 460 DSLLAQTQNLSLNSSTPTKQEKTEDVLFKDLVDFA 494


>Glyma04g42250.1 
          Length = 514

 Score =  136 bits (343), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/156 (55%), Positives = 103/156 (66%), Gaps = 1/156 (0%)

Query: 1   MVDYLSGDAYETEVSYDNSEPTPYAVPLHSDXXXXXXXXXXXXXXXXXXXMNTSTPGFSK 60
           MVDYLSGD Y+TE S +NSEPT +  PLHS                      TS+P FS 
Sbjct: 345 MVDYLSGDTYKTEGSPENSEPTSFTAPLHSSPNPTSSTIPSLSSSHPHAVSTTSSPIFSS 404

Query: 61  QPIYDE-PSPVNKSSESLSPAPGDTQSPGILPPPPARFNQRQNFFEEQGMXXXXXXXXXX 119
           +P+YDE PS  +KSSE L  AP D QSPGI+PPPP+++NQRQ FFE+QG+          
Sbjct: 405 EPVYDEQPSSEDKSSECLPAAPWDAQSPGIIPPPPSKYNQRQQFFEQQGVSHSSSGSSSS 464

Query: 120 XXXLLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 155
              L+GQTQNLSLNSSTPTKQ+K EDALFKDL+DFA
Sbjct: 465 YDSLVGQTQNLSLNSSTPTKQQKPEDALFKDLVDFA 500


>Glyma06g12570.1 
          Length = 512

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/156 (57%), Positives = 104/156 (66%), Gaps = 2/156 (1%)

Query: 1   MVDYLSGDAYETEVSYDNSEPTPYAVPLHSDXXXXXXXXXXXXXXXXXXXMNTSTPGFSK 60
           MVDYLSGD Y+TE S +NSEPT  A PLHS                    M+TS+P  S 
Sbjct: 344 MVDYLSGDTYKTEGSPENSEPTSIAAPLHS-SPNPTSSTIPSLSSSRPHAMSTSSPILSS 402

Query: 61  QPIYDE-PSPVNKSSESLSPAPGDTQSPGILPPPPARFNQRQNFFEEQGMXXXXXXXXXX 119
           QP+YDE PS V+KSSE L  AP D QSPGI+PPPP+++NQRQ FFE+QG           
Sbjct: 403 QPVYDEQPSSVDKSSEGLPAAPWDAQSPGIIPPPPSKYNQRQQFFEQQGASHSSSGSNSS 462

Query: 120 XXXLLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 155
              L+GQTQNLSLNSS+PTKQ+K EDALFKDL+DFA
Sbjct: 463 SDSLVGQTQNLSLNSSSPTKQQKPEDALFKDLVDFA 498