Miyakogusa Predicted Gene

Lj0g3v0266429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266429.1 tr|I6LNS9|I6LNS9_HEVBR Mitochondrial 50S
ribosomal protein L21 OS=Hevea brasiliensis GN=mRPL21 PE=2
,52.17,0.000000000000009,seg,NULL,gene.g20678.t1.1
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g31650.1                                                        67   3e-12
Glyma13g24790.1                                                        67   4e-12

>Glyma07g31650.1 
          Length = 262

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/73 (56%), Positives = 44/73 (60%), Gaps = 25/73 (34%)

Query: 1   MLLGSATQTIICRPTVPDAAVHAVVEEH-------------------------ELTKLRI 35
           +LLGSA+QTI+ RP VPDAAVHAVVEEH                         ELTKLRI
Sbjct: 171 LLLGSASQTIVGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 230

Query: 36  TDIQGIEKPPIVL 48
           TDIQGIEKP  VL
Sbjct: 231 TDIQGIEKPQNVL 243


>Glyma13g24790.1 
          Length = 267

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/73 (57%), Positives = 44/73 (60%), Gaps = 25/73 (34%)

Query: 1   MLLGSATQTIICRPTVPDAAVHAVVEEH-------------------------ELTKLRI 35
           +LLGSA+QTII RP VPDAAVHAVVEEH                         ELTKLRI
Sbjct: 176 LLLGSASQTIIGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235

Query: 36  TDIQGIEKPPIVL 48
           TDIQGIEKP  VL
Sbjct: 236 TDIQGIEKPQNVL 248