Miyakogusa Predicted Gene

Lj0g3v0266349.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266349.4 Non Chatacterized Hit- tr|F6HWY1|F6HWY1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.52,2e-19,alpha/beta knot,NULL; SUBFAMILY NOT NAMED,NULL; RNA
METHYLTRANSFERASE,NULL; SpoU_methylase,tRNA/rRNA,CUFF.17563.4
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g37630.1                                                       149   6e-37

>Glyma08g37630.1 
          Length = 324

 Score =  149 bits (377), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 77/99 (77%), Positives = 88/99 (88%)

Query: 1   MDYLIIPDKAEIPNGLVTSTASIVHVSSIVMRKLSGLQSTDSVDAIALIKIPDSVFNLDG 60
           MD LI+PDKA+IP+GL  STAS+V VSS+VMRKLSGLQ+T+S+DAIAL+KIP S F++D 
Sbjct: 96  MDCLILPDKADIPDGLDKSTASVVRVSSVVMRKLSGLQTTESLDAIALMKIPASFFSVDD 155

Query: 61  DQNNCYKWFPSAHRILVLDGIQDPGNLGTLLRSAVAFRW 99
            Q NC KWFPS HRILVLDGIQDPGNLGTLLRSAVAFRW
Sbjct: 156 HQKNCLKWFPSVHRILVLDGIQDPGNLGTLLRSAVAFRW 194