Miyakogusa Predicted Gene

Lj0g3v0266309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266309.1 tr|G7K743|G7K743_MEDTR Serine
palmitoyltransferase OS=Medicago truncatula GN=MTR_5g072020 PE=4
SV=1,87.17,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; SERINE PALMITOYL,CUFF.17571.1
         (308 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g35800.1                                                       528   e-150
Glyma14g09380.1                                                       528   e-150
Glyma16g26210.1                                                       106   3e-23
Glyma02g07250.1                                                       105   9e-23
Glyma12g29290.1                                                        91   1e-18
Glyma04g16260.2                                                        65   8e-11
Glyma04g16260.1                                                        65   8e-11
Glyma06g47430.1                                                        65   8e-11

>Glyma17g35800.1 
          Length = 483

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 249/304 (81%), Positives = 270/304 (88%)

Query: 5   MAATVVDFVNTALGWLSFAVDAPSARAVVFGVNIGGHXXXXXXXXXXXXXXXSQKSYKPP 64
           MA+ VV+F+N  L W++FA D PSARAVVFGV+IGGH               SQKSYKPP
Sbjct: 1   MASAVVNFLNATLDWVTFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPP 60

Query: 65  KRPLTNKEIDELCDEWAPESLIPSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYL 124
           KRPLTNKEIDELCDEW PE LIPSLN+E+ YEPPVLE AAGPHTI+NGK+VVNF+SANYL
Sbjct: 61  KRPLTNKEIDELCDEWVPEPLIPSLNKELQYEPPVLERAAGPHTIINGKEVVNFASANYL 120

Query: 125 GLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 184
           G +GH KLLDSC+SAL KYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP+SILYSYGLS
Sbjct: 121 GFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLS 180

Query: 185 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLEKITIKYK 244
           TMFSAIPAFSKKGD+IVADEGVHWGIQNGL+LSRSTVVYFKHNDMDSLRETLE IT KYK
Sbjct: 181 TMFSAIPAFSKKGDVIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLENITAKYK 240

Query: 245 RVKNLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYY 304
           + KNLRRYIV+EA+YQNSG+IAPLDEIIKLKEKYRFRVL+DESNS GVLGSSGRGLTEY 
Sbjct: 241 KAKNLRRYIVIEAVYQNSGEIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEYC 300

Query: 305 DVPV 308
            VPV
Sbjct: 301 GVPV 304


>Glyma14g09380.1 
          Length = 483

 Score =  528 bits (1359), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/304 (82%), Positives = 271/304 (89%)

Query: 5   MAATVVDFVNTALGWLSFAVDAPSARAVVFGVNIGGHXXXXXXXXXXXXXXXSQKSYKPP 64
           MA+ VV+F+N  L W++FA D PSARAVVFGV+IGGH               SQKSYKPP
Sbjct: 1   MASAVVNFLNATLDWMTFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPP 60

Query: 65  KRPLTNKEIDELCDEWAPESLIPSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYL 124
           KRPLTNKEIDELCDEW PE LIPS+N+E+ YEPPVLESAAGPHTI+NGK+VVNF+SANYL
Sbjct: 61  KRPLTNKEIDELCDEWVPEPLIPSVNKELQYEPPVLESAAGPHTIINGKEVVNFASANYL 120

Query: 125 GLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 184
           G +GH KLLDSC+SAL KYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP+SILYSYGLS
Sbjct: 121 GFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLS 180

Query: 185 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLEKITIKYK 244
           TMFSAIPAFSKKGDIIVADEGVHWGIQNGL+LSRSTVVYFKHNDMD+LRETLE IT KYK
Sbjct: 181 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDALRETLENITSKYK 240

Query: 245 RVKNLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYY 304
           + KNLRRYIVVEA+YQNSGQIAPLDEIIKLKEKYRFRVL+DESNS GVLGSSGRGLTE+ 
Sbjct: 241 KTKNLRRYIVVEAVYQNSGQIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEHC 300

Query: 305 DVPV 308
            VPV
Sbjct: 301 GVPV 304


>Glyma16g26210.1 
          Length = 490

 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 10/199 (5%)

Query: 115 VVNFSSANYLGLVGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 170
            +N  S NYLG        + CT      L+KY   +C  R   GT  +HL+ E  +AKF
Sbjct: 102 CLNLGSYNYLGFAAAD---EYCTPRVVDTLKKYSPSTCSTRVDGGTTALHLELEECVAKF 158

Query: 171 LGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMD 230
           +G P +I++  G  T  + +P    KG++I++D   H  I NG   S +T+  F+HN+  
Sbjct: 159 VGKPAAIVFGMGYVTNSAILPVLMGKGNLIISDSLNHNSIVNGARGSGATIRVFQHNEPS 218

Query: 231 SLRETL-EKITIKYKRVKNLRRYI--VVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDES 287
            L E L E+I     R     + I  +VE IY   G++  L E+I + +KY+    +DE+
Sbjct: 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEA 278

Query: 288 NSFGVLGSSGRGLTEYYDV 306
           +S G +G +GRG+ E   V
Sbjct: 279 HSIGAVGKTGRGVCELLGV 297


>Glyma02g07250.1 
          Length = 489

 Score =  105 bits (261), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 10/199 (5%)

Query: 115 VVNFSSANYLGLVGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 170
            +N  S NYLG        + CT      L+KY   +C  R   GT  +HL+ E  +A F
Sbjct: 102 CLNLGSYNYLGFAAAD---EYCTPRVVDTLKKYSPSTCSTRVDGGTTVLHLELEECVANF 158

Query: 171 LGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMD 230
           +G P +I++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN+  
Sbjct: 159 VGKPAAIVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNEPS 218

Query: 231 SLRETL-EKITIKYKRVKNLRRYI--VVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDES 287
            L E L E+I     R     + I  VVE IY   G++  L E+I + +KY+    +DE+
Sbjct: 219 HLEEVLREQIAEGQPRTHRPWKKIMVVVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEA 278

Query: 288 NSFGVLGSSGRGLTEYYDV 306
           +S G +G SGRG+ E   V
Sbjct: 279 HSIGAVGKSGRGVCELLGV 297


>Glyma12g29290.1 
          Length = 81

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 22/101 (21%)

Query: 102 SAAGPHTIVNGKDVVNF--SSANYLGLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDV 159
           SA G HTI+NGK+VVNF  S+A  +G        ++C   +             +   DV
Sbjct: 1   SAVGSHTIINGKEVVNFLCSAAGTIG--------NACMLMIT------------FLFPDV 40

Query: 160 HLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDII 200
           HLDCEARIAK LGTP+S +YS GLSTMFS I AFSKKGD+I
Sbjct: 41  HLDCEARIAKILGTPESFMYSDGLSTMFSVILAFSKKGDVI 81


>Glyma04g16260.2 
          Length = 363

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 26/238 (10%)

Query: 87  PSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYLGLVGHQKLLDSCTSALEKYGVG 146
           PS  +E++    V    AG  +    K ++ FS  +YLGL  H  +  +   A +++G+G
Sbjct: 79  PSSGDEIVCSAAVGGDEAGA-SYEKFKKLILFSGNDYLGLSSHPTIGKAAAKAAQEHGMG 137

Query: 147 SCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVA---- 202
             G     G  + H   E+ +A      D +L   G +   + + A    G ++      
Sbjct: 138 PRGSALICGYTNYHRLLESSLADLKKKEDCLLCPTGFAANMALMTAIGSIGTLLAGNRIP 197

Query: 203 --DEGV--------HWGIQNGLHLS---RSTVVY-FKHNDMDSLRETLEKITIKYKRVKN 248
             DE +        H  I +G+ L+   +S  VY ++H D+  L   L    ++      
Sbjct: 198 SEDEKIAVFSDALNHASIIDGIRLAERQKSVKVYVYRHCDVSHLNMLLSNCRMR------ 251

Query: 249 LRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYYDV 306
            ++ +V ++++   G  AP+ E+  L++K+ F +++D+++   V G +G G+ E ++ 
Sbjct: 252 -KKVVVTDSLFSMDGDYAPMVELADLRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNC 308


>Glyma04g16260.1 
          Length = 477

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 26/238 (10%)

Query: 87  PSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYLGLVGHQKLLDSCTSALEKYGVG 146
           PS  +E++    V    AG  +    K ++ FS  +YLGL  H  +  +   A +++G+G
Sbjct: 79  PSSGDEIVCSAAVGGDEAGA-SYEKFKKLILFSGNDYLGLSSHPTIGKAAAKAAQEHGMG 137

Query: 147 SCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVA---- 202
             G     G  + H   E+ +A      D +L   G +   + + A    G ++      
Sbjct: 138 PRGSALICGYTNYHRLLESSLADLKKKEDCLLCPTGFAANMALMTAIGSIGTLLAGNRIP 197

Query: 203 --DEGV--------HWGIQNGLHLS---RSTVVY-FKHNDMDSLRETLEKITIKYKRVKN 248
             DE +        H  I +G+ L+   +S  VY ++H D+  L   L    ++      
Sbjct: 198 SEDEKIAVFSDALNHASIIDGIRLAERQKSVKVYVYRHCDVSHLNMLLSNCRMR------ 251

Query: 249 LRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYYDV 306
            ++ +V ++++   G  AP+ E+  L++K+ F +++D+++   V G +G G+ E ++ 
Sbjct: 252 -KKVVVTDSLFSMDGDYAPMVELADLRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNC 308


>Glyma06g47430.1 
          Length = 477

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 25/212 (11%)

Query: 113 KDVVNFSSANYLGLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 172
           K ++ FS  +YLGL  H  +  +   A +++G+G  G     G  + H   E+ +A    
Sbjct: 104 KKLILFSGNDYLGLSSHPTIGKAVAKAAQEHGMGPRGSALICGYTNYHRLLESSLADLKK 163

Query: 173 TPDSILYSYGLSTMFSAIPAFSKKGDIIVA------DEGV--------HWGIQNGLHLS- 217
             D +L   G +   + + A    G ++        DE +        H  I +G+ L+ 
Sbjct: 164 KEDCLLCPTGFAANMALMTAIGSIGTLLAGNSIPSEDEKIAVFSDALNHASIIDGIRLTE 223

Query: 218 --RSTVVY-FKHNDMDSLRETLEKITIKYKRVKNLRRYIVVEAIYQNSGQIAPLDEIIKL 274
             +S  VY ++H DM  L   L    ++       ++ +V ++++   G  AP+ E+  L
Sbjct: 224 RQKSVKVYVYRHCDMSHLNMLLSNCRMR-------KKVVVTDSLFSMDGDYAPMVELADL 276

Query: 275 KEKYRFRVLMDESNSFGVLGSSGRGLTEYYDV 306
           ++++ F +++D+++   V G +G G+ E ++ 
Sbjct: 277 RKRHGFLLVIDDAHGTFVCGKNGGGVAEEFNC 308