Miyakogusa Predicted Gene

Lj0g3v0266149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266149.1 Non Chatacterized Hit- tr|B8A712|B8A712_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,54.39,2e-19,Ubiquitin homologues,Ubiquitin; Ubiquitin-like,NULL;
PREDICTED: SIMILAR TO UBIQUITIN,NULL; UBIQUITIN,CUFF.17547.1
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g13320.1                                                       166   9e-42
Glyma05g30160.1                                                       163   5e-41

>Glyma08g13320.1 
          Length = 329

 Score =  166 bits (419), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 97/121 (80%), Gaps = 6/121 (4%)

Query: 19  TQASNLREEEMPLKVKWSGKDYTVRVCGDDTIVELKRRICELTNVLPIRQKFLYPKLGSK 78
           T  ++   EE+ LKVKW G +YTVRVC DDT+ ELKRRICELTNVLP+RQK LYPKLGSK
Sbjct: 4   TATASASWEELTLKVKWIGNEYTVRVCADDTVGELKRRICELTNVLPLRQKLLYPKLGSK 63

Query: 79  LNDHSLNSLSIP-----KFTMIGTNEEDFLIVDPVEAPEIIDDLELPQEEAIDIKDMEVN 133
           LND SL    +P     K TMIGT EED L+VDPVE+PEI+DDLELP++EA+DIKDMEVN
Sbjct: 64  LNDDSLFLSQLPLNSSLKMTMIGTTEED-LLVDPVESPEILDDLELPKDEAVDIKDMEVN 122

Query: 134 K 134
           K
Sbjct: 123 K 123


>Glyma05g30160.1 
          Length = 329

 Score =  163 bits (413), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 98/122 (80%), Gaps = 6/122 (4%)

Query: 19  TQASNLREEEMPLKVKWSGKDYTVRVCGDDTIVELKRRICELTNVLPIRQKFLYPKLGSK 78
           T +++   EE+ LKVKWSG +YTVRVC DDT+ ELKRRICELTNVLP+RQK LYPKL SK
Sbjct: 3   TASASASWEELTLKVKWSGNEYTVRVCCDDTVGELKRRICELTNVLPLRQKLLYPKLASK 62

Query: 79  LNDHSLNSLSIP-----KFTMIGTNEEDFLIVDPVEAPEIIDDLELPQEEAIDIKDMEVN 133
           L+D SL    +P     K TMIGT EED L+VDPVE+PEI+DDLELP++EA+DIKDMEVN
Sbjct: 63  LSDDSLFLSQLPLNSSLKMTMIGTTEED-LLVDPVESPEILDDLELPKDEAVDIKDMEVN 121

Query: 134 KH 135
           K 
Sbjct: 122 KQ 123