Miyakogusa Predicted Gene
- Lj0g3v0266149.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0266149.1 Non Chatacterized Hit- tr|B8A712|B8A712_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,54.39,2e-19,Ubiquitin homologues,Ubiquitin; Ubiquitin-like,NULL;
PREDICTED: SIMILAR TO UBIQUITIN,NULL; UBIQUITIN,CUFF.17547.1
(135 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g13320.1 166 9e-42
Glyma05g30160.1 163 5e-41
>Glyma08g13320.1
Length = 329
Score = 166 bits (419), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 97/121 (80%), Gaps = 6/121 (4%)
Query: 19 TQASNLREEEMPLKVKWSGKDYTVRVCGDDTIVELKRRICELTNVLPIRQKFLYPKLGSK 78
T ++ EE+ LKVKW G +YTVRVC DDT+ ELKRRICELTNVLP+RQK LYPKLGSK
Sbjct: 4 TATASASWEELTLKVKWIGNEYTVRVCADDTVGELKRRICELTNVLPLRQKLLYPKLGSK 63
Query: 79 LNDHSLNSLSIP-----KFTMIGTNEEDFLIVDPVEAPEIIDDLELPQEEAIDIKDMEVN 133
LND SL +P K TMIGT EED L+VDPVE+PEI+DDLELP++EA+DIKDMEVN
Sbjct: 64 LNDDSLFLSQLPLNSSLKMTMIGTTEED-LLVDPVESPEILDDLELPKDEAVDIKDMEVN 122
Query: 134 K 134
K
Sbjct: 123 K 123
>Glyma05g30160.1
Length = 329
Score = 163 bits (413), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 98/122 (80%), Gaps = 6/122 (4%)
Query: 19 TQASNLREEEMPLKVKWSGKDYTVRVCGDDTIVELKRRICELTNVLPIRQKFLYPKLGSK 78
T +++ EE+ LKVKWSG +YTVRVC DDT+ ELKRRICELTNVLP+RQK LYPKL SK
Sbjct: 3 TASASASWEELTLKVKWSGNEYTVRVCCDDTVGELKRRICELTNVLPLRQKLLYPKLASK 62
Query: 79 LNDHSLNSLSIP-----KFTMIGTNEEDFLIVDPVEAPEIIDDLELPQEEAIDIKDMEVN 133
L+D SL +P K TMIGT EED L+VDPVE+PEI+DDLELP++EA+DIKDMEVN
Sbjct: 63 LSDDSLFLSQLPLNSSLKMTMIGTTEED-LLVDPVESPEILDDLELPKDEAVDIKDMEVN 121
Query: 134 KH 135
K
Sbjct: 122 KQ 123