Miyakogusa Predicted Gene

Lj0g3v0266139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266139.1 Non Chatacterized Hit- tr|I1JGV4|I1JGV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29324
PE,43.93,0.00000000006,seg,NULL; VQ,VQ,CUFF.17545.1
         (276 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g10780.1                                                       119   3e-27
Glyma06g10630.1                                                       113   2e-25

>Glyma04g10780.1 
          Length = 287

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 112/277 (40%), Gaps = 30/277 (10%)

Query: 16  RDHYLRHLNKLXXXXXXXXXXXXXTFHNNLXXXXXXXXXXXXXXXXXXXXXXXXVYNINK 75
           RD YLRHLNKL             TF +                          VYNINK
Sbjct: 25  RDQYLRHLNKLSQKISKPLIKKP-TF-DPPQAQAQAPNPNNQVQAQQNLQHQPPVYNINK 82

Query: 76  NDFRDVVQKLTGSPAHDRISTXXXXXXXXXXX--------------TNRPPQLMN-SAMP 120
           NDFRDVVQKLTGSPAHDRIST                         TNRPP L+N + +P
Sbjct: 83  NDFRDVVQKLTGSPAHDRISTPPPIQPPKPPSSRLQRIRPPPLPQITNRPPPLLNPTTLP 142

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXTVHAPAESPISAYMRDLQFL 180
           R                          R            TVHAPAESPISAYMRDLQ L
Sbjct: 143 R----------PQLPNAVTFNNFSVFSRPPAPLSPLPPFPTVHAPAESPISAYMRDLQTL 192

Query: 181 LPTMDSKNFSGFXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXFGCLNSPMSSYP 239
           +   ++++FSGF                                    FGCLNS ++SYP
Sbjct: 193 V-DSNARHFSGFSPFPPPPQPQQEQQQQQAMLPSQAPSSFQLPSSPVPFGCLNSQLASYP 251

Query: 240 LLSPGRLPFSPNSGQLGFXXXXXXXXXXXXXXRWRGL 276
           LLSPG L FSP SGQLGF              RW+G+
Sbjct: 252 LLSPGLL-FSPTSGQLGFPQLPLSPTVPVPSPRWKGI 287


>Glyma06g10630.1 
          Length = 295

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 109/292 (37%), Gaps = 53/292 (18%)

Query: 16  RDHYLRHLNKLXXXXXXXXXXXXXTFHNNLXXXXXXXXXXXXXXXXXXXXXXXXVYNINK 75
           RD YLRHLNKL                                           VYNINK
Sbjct: 26  RDQYLRHLNKLSQKISKPIIKKPV------------FDPPQAQVPNNQVQHQPPVYNINK 73

Query: 76  NDFRDVVQKLTGSPAHDRISTXXXXXXXXXXX--------------TNRPPQLMN-SAMP 120
           NDFRDVVQKLTGSPAHDRIST                         TNRPP L+N + +P
Sbjct: 74  NDFRDVVQKLTGSPAHDRISTPPPIQPPKPPSSRLQRIRPPPLPQITNRPPPLLNPTTLP 133

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXTVHAPAESPISAYMRDLQFL 180
           R                          R            TVHAPAESPISAYMRDLQ L
Sbjct: 134 R--------PQQLPNAVTFNNNFSVFSRPPAPLSPLPPFPTVHAPAESPISAYMRDLQTL 185

Query: 181 LPTMDSKNFSGFXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXX 224
           +   ++K+FSGF                                                
Sbjct: 186 V-DANAKHFSGFSPLPPPPLVQPQPQPQPQPQPQQEQQPQQQQQGMVPSQAPSSFQMPSS 244

Query: 225 XXXFGCLNSPMSSYPLLSPGRLPFSPNSGQLGFXXXXXXXXXXXXXXRWRGL 276
              FGCLNS ++SYPLLSPG L FSP SGQLGF              RW+G+
Sbjct: 245 PVPFGCLNSQLASYPLLSPGLL-FSPTSGQLGFPQLPLSPTVPVPSPRWKGI 295