Miyakogusa Predicted Gene

Lj0g3v0265759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0265759.1 Non Chatacterized Hit- tr|I1LI75|I1LI75_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,41.96,4e-19,RHODANESE_3,Rhodanese-like domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,R,NODE_58364_length_494_cov_102.149796.path2.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02040.1                                                       237   3e-63
Glyma16g23610.1                                                       137   4e-33
Glyma02g05260.1                                                       132   7e-32
Glyma01g37010.1                                                       125   1e-29
Glyma11g08260.1                                                       121   2e-28
Glyma11g08730.1                                                        99   1e-21
Glyma01g36620.1                                                        96   1e-20
Glyma01g36620.2                                                        90   8e-19
Glyma06g13770.1                                                        47   6e-06
Glyma04g41080.1                                                        46   9e-06

>Glyma12g02040.1 
          Length = 145

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 107/136 (78%), Positives = 125/136 (91%)

Query: 1   MDAPKDHQDVVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIAYMFSTEAGRV 60
           MD+PKDHQ+VV +DV AAKDLLNSSGYRYLDVR+VEEFNKSHV+NA N+ Y+F TEAGRV
Sbjct: 1   MDSPKDHQNVVTIDVHAAKDLLNSSGYRYLDVRSVEEFNKSHVENAHNVPYVFITEAGRV 60

Query: 61  KNPDFLDQVAAVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFA 120
           KNPDF+DQVAA+CK EDHL+VACNSGGR  +A +DLLDSG+K++ NMGGGYSAWVDAGFA
Sbjct: 61  KNPDFVDQVAAICKTEDHLIVACNSGGRSLRASVDLLDSGFKNIVNMGGGYSAWVDAGFA 120

Query: 121 GDKPAEELKTACKFRP 136
           G+KP E+LKT+CKFRP
Sbjct: 121 GNKPGEDLKTSCKFRP 136


>Glyma16g23610.1 
          Length = 169

 Score =  137 bits (344), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/129 (52%), Positives = 84/129 (65%), Gaps = 3/129 (2%)

Query: 9   DVVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVD--NALNIAYMFSTEAGRVKNPDFL 66
           +VV VDV A KDL+ +S + YLDVRTVEEF K HVD    +NI YMF+T  GRVKNP+FL
Sbjct: 24  EVVTVDVHATKDLIQTS-HVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFL 82

Query: 67  DQVAAVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGDKPAE 126
            +V++ CK+EDH++V C SG R   A  DLL  G+K V NMGGGY  WV   F    P E
Sbjct: 83  KEVSSACKKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYMDWVKKEFPVKAPLE 142

Query: 127 ELKTACKFR 135
            +K     +
Sbjct: 143 LVKNEVPVK 151


>Glyma02g05260.1 
          Length = 158

 Score =  132 bits (333), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 3/129 (2%)

Query: 9   DVVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVD--NALNIAYMFSTEAGRVKNPDFL 66
           +VV VDV A KDL+ +S + YLDVRTVEEF K HVD    +N+AYMF+T  GRVKNP+FL
Sbjct: 12  EVVTVDVHATKDLIQTS-HVYLDVRTVEEFQKGHVDAEKIINVAYMFNTPEGRVKNPEFL 70

Query: 67  DQVAAVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGDKPAE 126
            +V+  CK+EDH++V C SG R   A  DLL  G+K V NMGGGY  WV        P +
Sbjct: 71  KEVSYACKKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYLDWVKNELPVKAPLD 130

Query: 127 ELKTACKFR 135
            +K   + +
Sbjct: 131 SVKIELQVK 139


>Glyma01g37010.1 
          Length = 149

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 81/123 (65%), Gaps = 5/123 (4%)

Query: 10  VVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVD--NALNIAYMFSTEAGRVKNPDFLD 67
           VV +DV AAK L+ + G  YLDVRTVEEF K HVD  N LNI YM +T  G+VKNPDFL 
Sbjct: 28  VVAIDVHAAKRLIQT-GSIYLDVRTVEEFKKGHVDAVNVLNIPYMLNTPKGKVKNPDFLK 86

Query: 68  QVAAVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGDKPA-- 125
           +V++ C +EDHL++ C SG R   A  DLL  G+K+V +MGGGY  WV   F    P   
Sbjct: 87  EVSSACNKEDHLILGCQSGVRSLYATADLLSEGFKNVKDMGGGYVDWVKNKFPVIIPVAK 146

Query: 126 EEL 128
           EEL
Sbjct: 147 EEL 149


>Glyma11g08260.1 
          Length = 149

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 80/123 (65%), Gaps = 5/123 (4%)

Query: 10  VVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHV--DNALNIAYMFSTEAGRVKNPDFLD 67
           VV +DV AAK L+ + G  YLDVRTVEEF K HV  DN LNI YM +T  G+VKN DFL 
Sbjct: 28  VVTIDVRAAKSLIQT-GSIYLDVRTVEEFKKGHVYADNVLNIPYMLNTPKGKVKNGDFLK 86

Query: 68  QVAAVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGDKP--A 125
           +V++ C +EDHL+V C SG R   A  DLL  G+K+  +MGGGY  WV   F  + P   
Sbjct: 87  EVSSACNKEDHLVVGCQSGVRSLYATADLLSDGFKNAKDMGGGYVDWVKNKFPVNIPEAK 146

Query: 126 EEL 128
           EEL
Sbjct: 147 EEL 149


>Glyma11g08730.1 
          Length = 185

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 11  VNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIAYMFSTEAGRVKNPDFLDQVA 70
            +V V  A +LL  +G+RYLDVRT EEFN  H   A+NI YMF   +G  KN +F+ +V+
Sbjct: 74  TSVPVRVAYELL-LAGHRYLDVRTPEEFNAGHAPGAINIPYMFRVGSGMTKNSNFIREVS 132

Query: 71  AVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGD 122
           +  ++ED ++V C  G R   A  DLL +G+  + +M GGY+AW   G   +
Sbjct: 133 SNFRKEDEIIVGCELGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTE 184


>Glyma01g36620.1 
          Length = 186

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 11  VNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIAYMFSTEAGRVKNPDFLDQVA 70
            +V V  A +LL  +G+RYLDVRT EEF+  H   A+NI YMF   +G  KN +F+ +V+
Sbjct: 75  TSVPVRVAYELL-LAGHRYLDVRTPEEFDAGHAPGAINIPYMFRVGSGMTKNSNFIREVS 133

Query: 71  AVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGD 122
           +  +++D ++V C  G R   A  DLL +G+  + +M GGY+AW   G   +
Sbjct: 134 SQFRKDDEIIVGCELGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTE 185


>Glyma01g36620.2 
          Length = 185

 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 2/112 (1%)

Query: 11  VNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIAYMFSTEAGRVKNPDFLDQVA 70
            +V V  A +LL  +G+RYLDVRT EEF+  H   A+NI YMF   +G  KN +F+ +V+
Sbjct: 75  TSVPVRVAYELL-LAGHRYLDVRTPEEFDAGHAPGAINIPYMFRVGSGMTKNSNFIREVS 133

Query: 71  AVCKREDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGD 122
           +  +++D  ++ C  G R   A  DLL +G+  + +M GGY+AW   G   +
Sbjct: 134 SQFRKDDE-IIGCELGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTE 184


>Glyma06g13770.1 
          Length = 234

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 37/149 (24%)

Query: 10  VVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIA-YMFSTE------AGRV-- 60
           V +VD + A  L   + +  LDVR   EF ++H  +A+N+  Y    E      A R   
Sbjct: 86  VRSVDAKEAFRLQKENKFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAF 145

Query: 61  ----------KNPDFLDQVAAVCKREDHLLVACNSGG--------------RGRKAVIDL 96
                     +NP+F+  V A   +   ++VAC++GG              R   A   L
Sbjct: 146 AFFGIFAGTEENPEFIQSVEAKLDKNAKIIVACSAGGTMKPSQNLPEGQQSRSLIAAYLL 205

Query: 97  LDSGYKHVFNMGGGYSAWVDAGFAGDKPA 125
           + +GY +VF++ GG  +W    F  D P+
Sbjct: 206 VLNGYTNVFHLEGGLYSW----FKEDLPS 230


>Glyma04g41080.1 
          Length = 234

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 37/149 (24%)

Query: 10  VVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIA-YMFSTE------AGRV-- 60
           V +VD + A  L   + +  LDVR   EF ++H  +A+N+  Y    E      A R   
Sbjct: 86  VRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAF 145

Query: 61  ----------KNPDFLDQVAAVCKREDHLLVACNSGG--------------RGRKAVIDL 96
                     +NP+F+  V A   +   ++VAC++GG              R   A   L
Sbjct: 146 AFFGIFAGTEENPEFIQSVEAKLDKNAKIIVACSAGGTMKPSQNLPEGQQSRSLIAAYLL 205

Query: 97  LDSGYKHVFNMGGGYSAWVDAGFAGDKPA 125
           +  GY +VF++ GG  +W    F  D P+
Sbjct: 206 VLDGYTNVFHLEGGLYSW----FKEDLPS 230