Miyakogusa Predicted Gene

Lj0g3v0265589.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0265589.3 Non Chatacterized Hit- tr|F6GUK3|F6GUK3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,74.68,2e-19,RRM_1,RNA recognition motif domain; no
description,Nucleotide-binding, alpha-beta plait;
SERINE/ARGI,CUFF.17519.3
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g15820.2                                                        80   4e-16
Glyma09g15820.1                                                        80   4e-16
Glyma14g36670.1                                                        70   6e-13
Glyma02g38540.1                                                        70   7e-13
Glyma02g38540.2                                                        69   8e-13
Glyma07g38270.1                                                        60   8e-10
Glyma17g02470.1                                                        59   9e-10
Glyma02g41510.2                                                        55   2e-08
Glyma02g41510.1                                                        55   2e-08
Glyma14g07440.1                                                        55   2e-08
Glyma02g26700.1                                                        50   8e-07

>Glyma09g15820.2 
          Length = 205

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 40/44 (90%)

Query: 34 ERDLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          +RDLPTSLLVRNL+RD R EDLHGPF  FGP+KDVYLPRDYYTG
Sbjct: 35 DRDLPTSLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTG 78


>Glyma09g15820.1 
          Length = 205

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 40/44 (90%)

Query: 34 ERDLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          +RDLPTSLLVRNL+RD R EDLHGPF  FGP+KDVYLPRDYYTG
Sbjct: 35 DRDLPTSLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTG 78


>Glyma14g36670.1 
          Length = 249

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 36/44 (81%)

Query: 34 ERDLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          ++DLPTSLLVRNL  D R EDL  PF  FGP+KD+YLP+DYYTG
Sbjct: 36 QQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTG 79


>Glyma02g38540.1 
          Length = 253

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 36/44 (81%)

Query: 34 ERDLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          ++DLPTSLLVRNL  D R EDL  PF  FGP+KD+YLP+DYYTG
Sbjct: 36 QQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTG 79


>Glyma02g38540.2 
          Length = 192

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 36/44 (81%)

Query: 34 ERDLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          ++DLPTSLLVRNL  D R EDL  PF  FGP+KD+YLP+DYYTG
Sbjct: 36 QQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTG 79


>Glyma07g38270.1 
          Length = 243

 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 32/41 (78%)

Query: 37 LPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          LP+ LLVRNL  D R EDL  PF  +GP+KDVYLP++YYTG
Sbjct: 47 LPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTG 87


>Glyma17g02470.1 
          Length = 254

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 32/41 (78%)

Query: 37 LPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          LP+ LLVRNL  D R EDL  PF  +GP+KDVYLP++YYTG
Sbjct: 47 LPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTG 87


>Glyma02g41510.2 
          Length = 276

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 31/42 (73%)

Query: 36 DLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          D   SLLVRN+  D R E+L  PF  FGP++DVY+P+DYY+G
Sbjct: 44 DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSG 85


>Glyma02g41510.1 
          Length = 276

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 31/42 (73%)

Query: 36 DLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          D   SLLVRN+  D R E+L  PF  FGP++DVY+P+DYY+G
Sbjct: 44 DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSG 85


>Glyma14g07440.1 
          Length = 271

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 31/42 (73%)

Query: 36 DLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTG 77
          D   SLLVRN+  D R E+L  PF  FGP++DVY+P+DYY+G
Sbjct: 37 DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSG 78


>Glyma02g26700.1 
          Length = 141

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/25 (80%), Positives = 22/25 (88%)

Query: 53 EDLHGPFSHFGPIKDVYLPRDYYTG 77
          +DLH PF  FGP+KDVYLPRDYYTG
Sbjct: 2  QDLHSPFGQFGPLKDVYLPRDYYTG 26