Miyakogusa Predicted Gene

Lj0g3v0265109.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0265109.1 tr|G7IKW7|G7IKW7_MEDTR SNW domain-containing
protein OS=Medicago truncatula GN=MTR_2g030450 PE=4
SV=,85.93,0,seg,NULL; SKIP_SNW,SKI-interacting protein SKIP, SNW
domain; NUCLEAR PROTEIN SKIP-RELATED,SKI-intera,CUFF.17517.1
         (523 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01190.1                                                       744   0.0  
Glyma16g08450.1                                                       702   0.0  
Glyma18g13100.1                                                        85   2e-16

>Glyma01g01190.1 
          Length = 542

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/525 (73%), Positives = 410/525 (78%), Gaps = 9/525 (1%)

Query: 1   MGRDKS-SKTGSKILPVTVDAHGNVAYDAIVKQNENAKKIVYTQQKDLIPKILKNXXXXX 59
           MGR+KS +K GSKILPVTVDA+GNVAYDAIV+QNENA+KIVYTQQKDLIPK LKN     
Sbjct: 25  MGREKSGAKPGSKILPVTVDANGNVAYDAIVRQNENARKIVYTQQKDLIPKFLKNDEDDD 84

Query: 60  XXXXXX-VQKEIEETMQETKAALEKIVNVRLSAAQPKNVAKQSSDSKYIKYKPSQQSAAF 118
                   QK+IEETMQETKAALEKIVNVRLSAAQPKNV KQ+SD+KYIKYKPSQQS AF
Sbjct: 85  DVVSDDEAQKQIEETMQETKAALEKIVNVRLSAAQPKNVPKQNSDAKYIKYKPSQQSDAF 144

Query: 119 NSGAKERVIRMVEMPVDPLEPPKFKHKRVPKAXXXXXXXXXXXXXXXXTVKDQQDWKIPP 178
           NSGAKERVIRMVEMPVDPLEPPKFKHKRVPKA                TVKDQQDWKIPP
Sbjct: 145 NSGAKERVIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPP 204

Query: 179 CISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSESLYVAEQKAREAVAMRSKVX 238
           CISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSE+LYVAEQKAREAVAMRSKV 
Sbjct: 205 CISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKVQ 264

Query: 239 XXXXXXXXXXXXXXXXXXAQKARSERTGXXXXXXXXXXXXXXXXXXXXDADMRGDYEHPR 298
                             AQKARSER G                    + DMR DYEH  
Sbjct: 265 KEMMLKEKERKEQELRALAQKARSERIGGERIGVVPAAPPAVAVD---EDDMRVDYEH-- 319

Query: 299 EREKNFPKESREEREDXXXXXXXXXXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISE 358
             EK  P+E   ER                        AKDAAMGK+SKITRDRDRDISE
Sbjct: 320 --EKENPRERDRERSFRMQREKIREERRKERERERRLEAKDAAMGKRSKITRDRDRDISE 377

Query: 359 KVALGMATAKTGTEVMYDERLFNQDQGMSSGFATDDQYNVYDKGLFTAQPTLSTLYRPKK 418
           KVALGMA+ K GTEVMYDERLFNQD+G++SGFATDDQYNVY+ GLFTAQPTLSTLYRPKK
Sbjct: 378 KVALGMASTKPGTEVMYDERLFNQDKGIASGFATDDQYNVYEHGLFTAQPTLSTLYRPKK 437

Query: 419 DVDNETYGGADEQLEKIMKTDRFKPDKAFSGASERAGPRDRPVEFENEEADPFGLDQFLT 478
           ++D+ETYGGADEQLEKIMKTDRFKPDK F+GASERAGPRDRPVEFENEEADPFGLDQFLT
Sbjct: 438 NLDDETYGGADEQLEKIMKTDRFKPDKGFAGASERAGPRDRPVEFENEEADPFGLDQFLT 497

Query: 479 EVKKGKKAMEKVGGGGTMKASAGSSMRDGYEGGSSRTRIGFERGH 523
           EVKKGKKAMEKVGGGGTM+ASAGSSMRDG EGGS RTRIGFERGH
Sbjct: 498 EVKKGKKAMEKVGGGGTMRASAGSSMRDGNEGGSGRTRIGFERGH 542


>Glyma16g08450.1 
          Length = 512

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/498 (72%), Positives = 384/498 (77%), Gaps = 19/498 (3%)

Query: 32  QNENAKKIVYTQQKDLIPKILKNXXXXXXXXXXXVQKEIEETMQETKAALEKIVNVRLSA 91
           QNENA+KIVYTQQKDLIPK LKN            QK+IEETMQETKAALEKIVNVRLSA
Sbjct: 28  QNENARKIVYTQQKDLIPKCLKNDEEDDDVSDDETQKQIEETMQETKAALEKIVNVRLSA 87

Query: 92  AQPKNVAKQSSDSKYIKYKPSQQSAAFNSGAKERVIRMVEMPVDPLEPPKFKHKRVPKAX 151
           AQPKNV KQ++D+KYIKYKPSQQSAAFNSGAKERVIRMVEM VDPLEPPKFKHKRVPKA 
Sbjct: 88  AQPKNVPKQNTDAKYIKYKPSQQSAAFNSGAKERVIRMVEMAVDPLEPPKFKHKRVPKAS 147

Query: 152 XXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQIND 211
                          TVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQIND
Sbjct: 148 GSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQIND 207

Query: 212 NFAKLSESLYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXXXAQKARSERTGXXXXX 271
           NFAKLSE+LYVAEQKAREAVAMRSKV                   AQKARSER G     
Sbjct: 208 NFAKLSEALYVAEQKAREAVAMRSKVQKEMMLKEKERKEQELRALAQKARSERIGGERIG 267

Query: 272 XXXXXXXXXXXXXXXDADMRGDYEHPRER------EKNFPKESREEREDXXXXXXXXXXX 325
                                DY+H +E       E++F KESR+ERE+           
Sbjct: 268 VVPAAPPI-------------DYDHEKENPRERERERSFVKESRDEREERMQREKIREER 314

Query: 326 XXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEKVALGMATAKTGTEVMYDERLFNQDQG 385
                      AKDAAMGK+SKITRDRDRDISEKVALGMA+ K GTEVMYDERLFNQD+G
Sbjct: 315 RKERERERRLEAKDAAMGKRSKITRDRDRDISEKVALGMASTKPGTEVMYDERLFNQDKG 374

Query: 386 MSSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDVDNETYGGADEQLEKIMKTDRFKPDK 445
           ++SGFATDDQYNVY+ GLFTAQPTLSTLYRPKK++D+ETYGGADEQLEKIMKTDRFKPDK
Sbjct: 375 IASGFATDDQYNVYEHGLFTAQPTLSTLYRPKKNIDDETYGGADEQLEKIMKTDRFKPDK 434

Query: 446 AFSGASERAGPRDRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTMKASAGSSMR 505
            FSGASERAGPRDRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTM+ASAGSSMR
Sbjct: 435 GFSGASERAGPRDRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTMRASAGSSMR 494

Query: 506 DGYEGGSSRTRIGFERGH 523
           DG EGGS RTRIGFERGH
Sbjct: 495 DGNEGGSGRTRIGFERGH 512


>Glyma18g13100.1 
          Length = 139

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 64/141 (45%), Gaps = 55/141 (39%)

Query: 66  VQKEIEETMQETKAALEKIVNVRLSAAQPKNVAKQSSDSKYIKYKPSQQSAAFNSGAKER 125
           +Q +I+E MQETK  LE+   V                          Q+ A   G    
Sbjct: 40  MQNQIKEMMQETKPTLERASKV--------------------------QAQACYEGVGVY 73

Query: 126 VIRMVEMPVDPLEPPKFKHKRVPKAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKN 185
            + M+ +P+ P+                             TVKDQ+DWKIPPCISNWKN
Sbjct: 74  AMPMMHLPMQPV-----------------------------TVKDQKDWKIPPCISNWKN 104

Query: 186 PKGYTIPLDKRLAADGRGLQE 206
            KGY IP +KRLAADGRGL+E
Sbjct: 105 LKGYNIPHNKRLAADGRGLRE 125