Miyakogusa Predicted Gene

Lj0g3v0264869.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264869.1 Non Chatacterized Hit- tr|I1M061|I1M061_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51915 PE,69.72,0,GB DEF:
VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protei,CUFF.17733.1
         (1040 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24310.1                                                      1409   0.0  

>Glyma13g24310.1 
          Length = 2549

 Score = 1409 bits (3647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1037 (68%), Positives = 831/1037 (80%), Gaps = 10/1037 (0%)

Query: 1    MRSGSKIFQSSPSKCKSGF--ECESGIERTSNVFSIELHLYGIRVHFHDSSCIIGTIMVP 58
            MR GSK FQ SPSK KS F    E+GI  T ++FS ELHL+GIR HFHDSSCIIGTIMVP
Sbjct: 165  MRRGSKFFQVSPSKSKSDFVYSHETGIASTCDIFSTELHLFGIRAHFHDSSCIIGTIMVP 224

Query: 59   TSKTSLLLCEDNIDILSSSEGLVLTSSWGPRNFQDYLWGPSSENLSPILNVRVRKPQDKS 118
            TSK+SLL CED++DILSSSEGL LTSSWGP+NFQD LWGPSS NLSPILNVRVRK Q+ S
Sbjct: 225  TSKSSLLFCEDSMDILSSSEGLALTSSWGPQNFQDNLWGPSSPNLSPILNVRVRKGQNIS 284

Query: 119  SAVDLEISIGVQHVYCMLPSEYLSIIIGYFSLSDWAGDSSGQSSFEEP-----KIETGIT 173
            S +DLEISIG+QHVYCMLPSEYLSIIIGYFSLSDW G S  Q   +E      K E  IT
Sbjct: 285  STIDLEISIGIQHVYCMLPSEYLSIIIGYFSLSDWGGASGDQCFSDEQSDTDVKNEMKIT 344

Query: 174  YKFEILDSVLILPVESNEYQFLKVEIPQLYCSFVENLGFDDAMKDIPTKCFVPIQKLAKR 233
            YKFEILDS LI PV SN+ QF+K+E+PQLYCSF+EN G D+ +K+IP +C VPI KLAKR
Sbjct: 345  YKFEILDSNLIFPVVSNDRQFIKIEMPQLYCSFIENSGVDEVLKNIPPECLVPIHKLAKR 404

Query: 234  NSCLNVFGRDLFVSFLLYKNDMLGLATIE-NAEFISTSLIAPINADVWVRIPCRGVTNCK 292
            N CLNVFGRDLFVSFLLYKND+LGLAT+E N EF++++LIAPINADVWVRIP  G +NCK
Sbjct: 405  NDCLNVFGRDLFVSFLLYKNDLLGLATVERNTEFLTSALIAPINADVWVRIPVGGKSNCK 464

Query: 293  NYSPSICFMTSIRSCQLIAEDSHCLDGCLAIRDVIEEFSTIGDQSKCFKSDVLQFLHSKR 352
            + S SICFMTSI SC ++AEDSH  DGC+AI DVIEEFS++ DQSKCFKSDVLQFL+SKR
Sbjct: 465  STS-SICFMTSISSCHIVAEDSHFFDGCMAIWDVIEEFSSVDDQSKCFKSDVLQFLNSKR 523

Query: 353  SLMETGVNNPTPMTSTIVLTEVKCCTESLLISCCHRHGDFVKLISKGDLRFTCAASLIDD 412
            SL  T   +PT M STI+ TEVKCC +SL IS  HR  DFV+LI+KGDL F C+ASLI+D
Sbjct: 524  SLEATRTISPTLMASTIMSTEVKCCAQSLFISFHHRKEDFVELITKGDLGFVCSASLIND 583

Query: 413  SLEWLELGFSSLAFYSSHNSVLAKCTSTPISTVVLGICLSKSVDFKNELSFHLPSLDIWL 472
            SL  L+LGFSS+ FYS  +S+LAKCT T  S  VL I  S+S+  KN+L   L S+DIWL
Sbjct: 584  SLVCLDLGFSSVVFYSPRDSILAKCTPTSFSMSVLSISFSQSIGGKNKLDLCLSSIDIWL 643

Query: 473  YLSEWTEVFKFLNDLSVHLEETPIDVASMSLPXXXXXXXXXXXXXXXXCSLDSEGASAPF 532
            +L+EWTEV KFLN   +HLE TP++  + SL                   LDSE  SAPF
Sbjct: 644  HLAEWTEVVKFLNHFRLHLERTPVNAITNSLSVDASNSVKKSTVQHSSSFLDSESTSAPF 703

Query: 533  ATQEIENVVLMTIRSKNACVKFYIPVSASEEPCVEFQIAESLEVTPLRVSSDVIEEKDTK 592
             +QEIEN V + I+S+N C+ F+IPV   EEP VEFQ ++ L VTPL VSSD++EEKD K
Sbjct: 704  TSQEIENDVFI-IKSENFCITFHIPVWVGEEPHVEFQHSQGLNVTPLSVSSDIVEEKDAK 762

Query: 593  FLTVSFNVNDFDLVMRSRDIHLKSNMEKLSCVIIIVENGRHTSWPLLDIIQVHMDTVLCK 652
            FLTVSFN+N F+LV+RSRDI L S MEKLS VI+IVENGRHTS PLLD+I+V +D VLCK
Sbjct: 763  FLTVSFNMNGFELVIRSRDIQLTSKMEKLSSVIMIVENGRHTSCPLLDVIEVQVDAVLCK 822

Query: 653  NQTNTIELKVEILCDHADVWLSHPTLLLLGAVKFDVPKSGSSQYSTSDITFKFQMRKVSI 712
            N TNTIEL VEI CD+++VW+SHPT  L  AVKFDVP+SG SQYSTS ITFKFQMRKVSI
Sbjct: 823  NHTNTIELNVEIACDNSNVWISHPTFHLWNAVKFDVPESGPSQYSTSGITFKFQMRKVSI 882

Query: 713  LLTDGKWSYNGPQLEILVRTILFHAIAIGKHVDCSITGDLQVNYKNIEKVSWEPFIEPWQ 772
            LLTDG+WSYNGP+LEILVR ILFH IA GKH++CS+ GDLQVNY NIEKVSWEPFIEPW+
Sbjct: 883  LLTDGRWSYNGPELEILVRNILFHTIASGKHMECSVNGDLQVNYNNIEKVSWEPFIEPWK 942

Query: 773  FLLTLVRDQEMNVLPNRPVSTDIVLGSRTQLNINITESLVECVSHAIEILNDAWGLKGSK 832
            F+LTLVR+QEM+V+PNR VSTDI+L S TQLNINITESLVEC+S A E+ +DA GL    
Sbjct: 943  FVLTLVREQEMSVMPNRSVSTDIILKSTTQLNINITESLVECLSRATEMFSDALGLMVLD 1002

Query: 833  DHEGKELSHSSCPQNMSSKRCAAPYVLQNLTSVPLLYHIYHGSSNPDEIFESDENPANYV 892
            DHEG +L HS C + M +++C APYVLQNLTSVPLLY ++HG  NPD++ +SDEN A YV
Sbjct: 1003 DHEGNKLVHSPCAEYMCTRKCGAPYVLQNLTSVPLLYQVFHGLVNPDDLHDSDENHAKYV 1062

Query: 893  QPGSAISVYMDENDEQRLPHYRHSNSSDSLNEQRSSGFTHHYITVQLDGASMPSDPISMD 952
            QPGS+I +YMDEN EQ+L  +R S+SSDSLNE RS+GF HHYITVQL+G S  S PISMD
Sbjct: 1063 QPGSSIPIYMDENAEQQLSRFRPSHSSDSLNEPRSNGFAHHYITVQLEGTSRSSGPISMD 1122

Query: 953  LVGLTCFEVNFSKTYDQNGQGGRMNSGATFVVPVVFDVSMLRYSKLIRIYSTVVLLNATS 1012
            LVGLTCFEVNFSKTY+   +   +N+  TFVVPVVFDVS+LR+SKLIRIYSTVVLLNATS
Sbjct: 1123 LVGLTCFEVNFSKTYNDTAEDNSLNTSPTFVVPVVFDVSVLRHSKLIRIYSTVVLLNATS 1182

Query: 1013 TPLELRFDIPFGVSPTV 1029
            TP+ELRFDIPF VSPT+
Sbjct: 1183 TPVELRFDIPFSVSPTL 1199