Miyakogusa Predicted Gene

Lj0g3v0264609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264609.1 Non Chatacterized Hit- tr|I1NHW4|I1NHW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2903
PE=,97.87,1e-17,CHAPERONIN-60KDA, CH60,NULL; CHAPERONIN,Chaperonin
Cpn60/TCP-1,NODE_15647_length_163_cov_172.061356.path1.1
         (47 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g33680.1                                                        94   3e-20
Glyma20g33910.1                                                        94   3e-20
Glyma10g25630.1                                                        92   1e-19
Glyma20g19980.1                                                        89   8e-19
Glyma07g01190.1                                                        74   3e-14
Glyma08g20560.1                                                        72   9e-14
Glyma08g20560.2                                                        70   5e-13
Glyma20g20320.1                                                        67   6e-12
Glyma06g36000.1                                                        64   5e-11
Glyma05g28200.1                                                        54   3e-08

>Glyma10g33680.1 
          Length = 577

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/47 (97%), Positives = 47/47 (100%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGINMAVD+VVTNLKSRARMISTSEEIAQVGTISANGERE
Sbjct: 142 MNAMDLRRGINMAVDTVVTNLKSRARMISTSEEIAQVGTISANGERE 188


>Glyma20g33910.1 
          Length = 575

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/47 (97%), Positives = 47/47 (100%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGINMAVD+VVTNLKSRARMISTSEEIAQVGTISANGERE
Sbjct: 142 MNAMDLRRGINMAVDAVVTNLKSRARMISTSEEIAQVGTISANGERE 188


>Glyma10g25630.1 
          Length = 575

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/47 (95%), Positives = 47/47 (100%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGI+MAVD+VVTNLKSRARMISTSEEIAQVGTISANGERE
Sbjct: 142 MNAMDLRRGISMAVDAVVTNLKSRARMISTSEEIAQVGTISANGERE 188


>Glyma20g19980.1 
          Length = 575

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/47 (93%), Positives = 46/47 (97%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGI+MAVD+VVTNLKSRARMISTSEEIAQVG ISANGERE
Sbjct: 142 MNAMDLRRGISMAVDAVVTNLKSRARMISTSEEIAQVGMISANGERE 188


>Glyma07g01190.1 
          Length = 574

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 40/47 (85%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           +N MDLR GIN AVD+V+T LK RA MISTSEEI QVGTISANGER+
Sbjct: 141 VNVMDLRHGINKAVDAVITELKRRALMISTSEEITQVGTISANGERD 187


>Glyma08g20560.1 
          Length = 574

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 39/47 (82%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           +N MDLR GIN AVD+V+T LKSR  MIST EEI QVGTISANGER+
Sbjct: 141 INVMDLRNGINKAVDAVITELKSRTLMISTPEEITQVGTISANGERD 187


>Glyma08g20560.2 
          Length = 431

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 37/44 (84%)

Query: 4  MDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
          MDLR GIN AVD+V+T LKSR  MIST EEI QVGTISANGER+
Sbjct: 1  MDLRNGINKAVDAVITELKSRTLMISTPEEITQVGTISANGERD 44


>Glyma20g20320.1 
          Length = 150

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 1/48 (2%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGT-ISANGERE 47
           MN++DLR G++MAV   V NLKS+ARMISTSEEIAQV   ISANGERE
Sbjct: 87  MNSLDLRCGLSMAVGDAVANLKSKARMISTSEEIAQVCWDISANGERE 134


>Glyma06g36000.1 
          Length = 150

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGT-ISANGERE 47
           MN++D R G++MAV   V NLKS+ARMISTSEEIAQV   ISANGERE
Sbjct: 87  MNSLDQRCGLSMAVGDAVANLKSKARMISTSEEIAQVCWDISANGERE 134


>Glyma05g28200.1 
          Length = 334

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 31/37 (83%), Gaps = 1/37 (2%)

Query: 12  MAVDSVVTNLKSRARMISTSEEIAQVGT-ISANGERE 47
           MAV + VTNLKSRARMISTSEEI QV   ISANGERE
Sbjct: 159 MAVGAAVTNLKSRARMISTSEEITQVCWDISANGERE 195