Miyakogusa Predicted Gene
- Lj0g3v0264369.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0264369.2 Non Chatacterized Hit- tr|I1N6M9|I1N6M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6621
PE=,94.59,0,TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA,NULL;
TRANSLATION INITIATION FACTOR EIF-2B,Initia,CUFF.17443.2
(185 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g07460.1 345 2e-95
Glyma19g05900.1 340 4e-94
Glyma06g23320.1 292 1e-79
Glyma17g13130.1 291 2e-79
Glyma18g51570.1 235 2e-62
Glyma08g28680.1 226 1e-59
Glyma18g22990.1 102 2e-22
Glyma03g42430.1 63 1e-10
Glyma19g45180.1 61 5e-10
Glyma07g05070.1 57 1e-08
Glyma11g21540.1 51 6e-07
Glyma11g21540.2 51 6e-07
Glyma13g33460.1 51 6e-07
Glyma07g10090.1 50 2e-06
>Glyma13g07460.1
Length = 634
Score = 345 bits (884), Expect = 2e-95, Method: Composition-based stats.
Identities = 160/185 (86%), Positives = 168/185 (90%)
Query: 1 MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
MILLHAHELG+QFRVVVVDSRP SCTYTHINAVSYIMHEVTRVFL
Sbjct: 450 MILLHAHELGRQFRVVVVDSRPKLRGQLLLRRLVENGLSCTYTHINAVSYIMHEVTRVFL 509
Query: 61 GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
GAS+VLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELG+PD+I
Sbjct: 510 GASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVI 569
Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGK 180
SNVLGREDV +LDGWA+IENLQLLNL+YDATPSDYVSMIVTDYGMVPPTSVPVIVREYG+
Sbjct: 570 SNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGR 629
Query: 181 EQVWI 185
EQVWI
Sbjct: 630 EQVWI 634
>Glyma19g05900.1
Length = 658
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/185 (87%), Positives = 168/185 (90%)
Query: 1 MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
MILLHAHELGKQFRVVVVDSRP SCTYTHINAVSYIMHEVTRVFL
Sbjct: 474 MILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFL 533
Query: 61 GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
GAS+VLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELG+PD+I
Sbjct: 534 GASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVI 593
Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGK 180
SNVLGREDV +LDGWA+IENLQLLNL+YDATPSDYVSMIVTDYGMVPPTSVPVIVREYG+
Sbjct: 594 SNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGR 653
Query: 181 EQVWI 185
EQVWI
Sbjct: 654 EQVWI 658
>Glyma06g23320.1
Length = 624
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 153/183 (83%)
Query: 1 MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
MILL+AH+LGKQFRVVVVDSRP SCTYTHINAVSY+MHEVTRVFL
Sbjct: 441 MILLYAHDLGKQFRVVVVDSRPKFESRALLRRLVARGLSCTYTHINAVSYVMHEVTRVFL 500
Query: 61 GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
GASS+L NGT Y++VGTACVAMVAH FRVPV++CCEAYKFHERVQLDSICSNELGDPD +
Sbjct: 501 GASSILCNGTAYAKVGTACVAMVAHTFRVPVLICCEAYKFHERVQLDSICSNELGDPDAV 560
Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGK 180
+ V GR DVNYLD W + +NLQLLNL YDATPSDYVS IVTD+GM+PPTSV VIVREYG+
Sbjct: 561 AVVPGRMDVNYLDNWTNQDNLQLLNLFYDATPSDYVSAIVTDHGMIPPTSVAVIVREYGR 620
Query: 181 EQV 183
E +
Sbjct: 621 EHL 623
>Glyma17g13130.1
Length = 555
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/185 (75%), Positives = 156/185 (84%)
Query: 1 MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
MILL+A+E GK+FRVVVVDSRP SCTYTHINAVSYIMHEVTRV L
Sbjct: 371 MILLYAYEQGKKFRVVVVDSRPRLEGQALLRRLVAKGLSCTYTHINAVSYIMHEVTRVLL 430
Query: 61 GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
GAS+VLSNGTVYSRVGT+CVAMVAHAF VPV++CCEAYKFHERVQLDSICSNELGDPD I
Sbjct: 431 GASAVLSNGTVYSRVGTSCVAMVAHAFHVPVLICCEAYKFHERVQLDSICSNELGDPDAI 490
Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGK 180
+ V GR DV+YL WA +NL+LLNL+YDATPSDYVS+IVTDYGM+PPTSVPVIVREYG+
Sbjct: 491 ARVPGRMDVSYLSNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYGR 550
Query: 181 EQVWI 185
E + +
Sbjct: 551 EHLLM 555
>Glyma18g51570.1
Length = 575
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/147 (77%), Positives = 121/147 (82%)
Query: 1 MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
MILLHAH LGKQFRVVVVDSRP SCTY HINAVSYIM+EVTRVFL
Sbjct: 426 MILLHAHGLGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYIHINAVSYIMNEVTRVFL 485
Query: 61 GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
GASSVLSNGTVYS VGTACVAMVAHAF VPV+VCCEAYKFHERVQ DSICSNELGDPD+I
Sbjct: 486 GASSVLSNGTVYSGVGTACVAMVAHAFHVPVLVCCEAYKFHERVQHDSICSNELGDPDVI 545
Query: 121 SNVLGREDVNYLDGWADIENLQLLNLI 147
S V REDVN+L+ WA+ ENLQLLNL+
Sbjct: 546 STVQSREDVNHLEAWANTENLQLLNLM 572
>Glyma08g28680.1
Length = 156
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/156 (73%), Positives = 126/156 (80%), Gaps = 10/156 (6%)
Query: 40 CTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYK 99
CTYTHIN VSYIM+EVTRVFLGASSVLSNGT+YS VGTACVAMVA AF VP++VCCEAYK
Sbjct: 1 CTYTHINVVSYIMNEVTRVFLGASSVLSNGTIYSGVGTACVAMVALAFCVPILVCCEAYK 60
Query: 100 FHERVQLDSICSNELGDPDIISNVLGREDVNYLDGWADIENL----------QLLNLIYD 149
FHERV DSIC NELGDPDI S V +ED N+L+ WA+ ENL L++ YD
Sbjct: 61 FHERVPHDSICINELGDPDITSTVQSKEDANHLEAWANTENLQLLNLILTLHSLIDANYD 120
Query: 150 ATPSDYVSMIVTDYGMVPPTSVPVIVREYGKEQVWI 185
ATPSDYVSMI+TDY MVPPTSVPVIVREY +EQV I
Sbjct: 121 ATPSDYVSMIITDYSMVPPTSVPVIVREYTREQVRI 156
>Glyma18g22990.1
Length = 288
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 66/109 (60%), Gaps = 17/109 (15%)
Query: 39 SCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAY 98
SCTYTH+NA+ Y+MHEVTRVFLG SS+L NGT ++ +
Sbjct: 149 SCTYTHLNAIYYVMHEVTRVFLGDSSILCNGTGHTSFSSRFFHFFH-------------- 194
Query: 99 KFHERVQLDSICSNELGDPDIISNVLGREDVNYLDGWADIENLQLLNLI 147
ERVQLDSIC NELGDPD I+ + R DVNYLD +N QLLNL+
Sbjct: 195 ---ERVQLDSICYNELGDPDAIAMIPRRMDVNYLDDRTSQDNFQLLNLL 240
>Glyma03g42430.1
Length = 382
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 2 ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
+L A + K FRV + RP S +AV+Y M EV VF+G
Sbjct: 217 VLKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVSVKLLIDSAVAYTMDEVDMVFVG 276
Query: 62 ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIIS 121
A V+ +G + + +GT +A+VAH+ PV V E+YKF LD ++
Sbjct: 277 ADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQ---------KDLA 327
Query: 122 NVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSV 171
L D G +++ D TP Y++++ TD G++ P+ V
Sbjct: 328 PALRPIDF----GVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVV 373
>Glyma19g45180.1
Length = 369
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 2 ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
+L A + K FRV + RP +AV+Y M EV VF+G
Sbjct: 204 VLKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVG 263
Query: 62 ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIIS 121
A V+ +G + + +GT +A+VAH+ PV V E+YKF LD ++
Sbjct: 264 ADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQ---------KDLA 314
Query: 122 NVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSV 171
L D G +++ D TP Y++++ TD G++ P+ V
Sbjct: 315 PALRPIDF----GVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVV 360
>Glyma07g05070.1
Length = 347
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 2 ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
IL A + K FRV + RP +AV+Y M EV VF+G
Sbjct: 182 ILKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVG 241
Query: 62 ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIIS 121
A V+ +G + + +GT +++VA + PV V E+YKF LD D+
Sbjct: 242 ADGVVESGGIINMMGTYQISLVAKSMSKPVYVAAESYKFARLYPLDQ--------KDLAP 293
Query: 122 NVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSV 171
+ V++ G +++ D TP Y++++ TD G++ P+ V
Sbjct: 294 AL---RPVDF--GVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVV 338
>Glyma11g21540.1
Length = 415
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 3 LLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLGA 62
L A E + F+VVV + P T +A ++ +V V +GA
Sbjct: 225 LCAAKEKKRSFKVVVAEGAPRYQGQVLAKELAARGIQTTVIADSATFAMISQVNMVIVGA 284
Query: 63 SSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICS-NELG 115
+V++NG V + +G VA+ A VP +V C Y + +V L + S +EL
Sbjct: 285 HAVMANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLTELRSPSELL 344
Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
D S++ +D +L ++N +D P + VS+ +TD G P+ + ++
Sbjct: 345 DFGEFSDL--------MDSATGSGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLI 396
Query: 176 REY 178
+Y
Sbjct: 397 ADY 399
>Glyma11g21540.2
Length = 391
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 3 LLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLGA 62
L A E + F+VVV + P T +A ++ +V V +GA
Sbjct: 201 LCAAKEKKRSFKVVVAEGAPRYQGQVLAKELAARGIQTTVIADSATFAMISQVNMVIVGA 260
Query: 63 SSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICS-NELG 115
+V++NG V + +G VA+ A VP +V C Y + +V L + S +EL
Sbjct: 261 HAVMANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLTELRSPSELL 320
Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
D S++ +D +L ++N +D P + VS+ +TD G P+ + ++
Sbjct: 321 DFGEFSDL--------MDSATGSGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLI 372
Query: 176 REY 178
+Y
Sbjct: 373 ADY 375
>Glyma13g33460.1
Length = 415
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 2 ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
L A E + F+V V + P T +AV ++ V V +G
Sbjct: 224 FLYAAKEKQRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVG 283
Query: 62 ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICSNELG 115
A +V++NG V + VG VA+ A VP +V C Y + V L NEL
Sbjct: 284 AHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLL-----NELR 338
Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
P + + E + +D + +L ++N +D P VS+ +TD G P+ + ++
Sbjct: 339 SPSELLDF--GEFSDCMDSASGAGSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLI 396
Query: 176 REY 178
+Y
Sbjct: 397 ADY 399
>Glyma07g10090.1
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 2 ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
L A E + F+V V + P T +AV ++ V V +G
Sbjct: 224 FLYAAKEKQRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVG 283
Query: 62 ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICSNELG 115
A +V++NG V + VG A+ A VP +V C Y + V L NEL
Sbjct: 284 AHAVMANGGVIAPVGLNMAALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLL-----NELR 338
Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
P + + E + +D + +L ++N +D P VS+ +TD G P+ + ++
Sbjct: 339 SPSELLDF--GEFSDCMDSASGAGSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLI 396
Query: 176 REY 178
+Y
Sbjct: 397 ADY 399