Miyakogusa Predicted Gene

Lj0g3v0264299.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264299.1 tr|G7KDM7|G7KDM7_MEDTR GTP-binding protein ERG
OS=Medicago truncatula GN=MTR_5g020440 PE=3
SV=1,64.52,0,coiled-coil,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; Prokaryotic type KH dom,CUFF.17430.1
         (385 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g27590.1                                                       390   e-108
Glyma08g32780.1                                                       120   2e-27
Glyma02g06100.1                                                        70   3e-12
Glyma16g24870.1                                                        70   4e-12
Glyma02g09560.1                                                        67   4e-11

>Glyma07g27590.1 
          Length = 416

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/230 (82%), Positives = 201/230 (87%), Gaps = 1/230 (0%)

Query: 157 KSLSVGIIGAPNAGKSALTNFMVGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGL 216
           KSLSVGIIGAPNAGKSALTN+MVGTKVAAVSRKTNTTTHEVVGV+TK DTQICFFDTPGL
Sbjct: 129 KSLSVGIIGAPNAGKSALTNYMVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTPGL 188

Query: 217 MLNCGGFPYRDVKARVESAWSSVNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMGERSIPN 276
           MLNCGGFPYRDVK RVESAWSSVNLYEVLIVIFDVHRH+TRPDSRVI+L+KRMG RSIPN
Sbjct: 189 MLNCGGFPYRDVKVRVESAWSSVNLYEVLIVIFDVHRHITRPDSRVIQLIKRMGARSIPN 248

Query: 277 QKRILCMNXXXXXXXXXXXXRVAEEFKDLPGYERHFMISGLKGSGVKDLTQYL-MEQAVG 335
           Q+RILCMN            +VAEEFKDLPGYER+FMISGLKG         L +  AV 
Sbjct: 249 QRRILCMNKIDLVEKKKDLLKVAEEFKDLPGYERYFMISGLKGHASFYFYFPLRISNAVQ 308

Query: 336 RPWDEDPFTMSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWKELR 385
           RPW+EDPFTMSEEVMKMIA EVVRERLLDHVHQEIPYD+EH+LIDWKELR
Sbjct: 309 RPWEEDPFTMSEEVMKMIALEVVRERLLDHVHQEIPYDVEHRLIDWKELR 358



 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 53/96 (55%), Gaps = 25/96 (26%)

Query: 1  MKALRILRRTLHSXXXXXXXXXXXXXVFRAFFSAQPQ-HDEDPITVTATAPQPSEQDAVF 59
          MKALR LRRTL+S             VFRAFFSAQPQ H +DP              +VF
Sbjct: 1  MKALRTLRRTLYSPTPAT--------VFRAFFSAQPQPHHDDPT-----------DSSVF 41

Query: 60 DSSQYEI---PIVHDQTQPKPTWEGKYRDRVNTVVF 92
          DSS Y +   P +  + +PKPTW+ KYR R + VVF
Sbjct: 42 DSSHYALEAEPTL--KPEPKPTWDEKYRARADRVVF 75


>Glyma08g32780.1 
          Length = 164

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 72/89 (80%), Gaps = 6/89 (6%)

Query: 297 RVAEEFKDLPGYERHFMISGLKGSGVKDLTQYLMEQAVGRPWDEDPFTMSEEVMKMIAKE 356
           +VA+EFKDLP YER+FMISGLKG   K       + AV R W+EDPFTMSEEVMKMIA E
Sbjct: 47  KVAKEFKDLPRYERNFMISGLKGGMSKR-----SDSAVRRAWEEDPFTMSEEVMKMIALE 101

Query: 357 VVRERLLDHVHQEIPYDIEHKLIDWKELR 385
           VVRERLLD +HQEI YD+EH+LIDWK+L+
Sbjct: 102 VVRERLLD-LHQEILYDVEHQLIDWKKLQ 129


>Glyma02g06100.1 
          Length = 421

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 106/230 (46%), Gaps = 16/230 (6%)

Query: 157 KSLSVGIIGAPNAGKSALTNFMVGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGL 216
           +S  V ++G PN GKS L N M+G K++ V+ K  TT H ++ + + ED Q+  +D PG+
Sbjct: 122 RSGYVTLLGKPNVGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSGEDYQMILYDKPGV 181

Query: 217 ----MLNCGGFPYRDVKARVESAWSSVNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMGER 272
               M        ++V++   +A       + ++V+ D  +   + D  + + +  + ++
Sbjct: 182 LQKEMHKLDSMMMKNVRSAAVNA-------DCVLVLVDARKAPEKIDGLLEEGIGDLKDK 234

Query: 273 SIPNQKRILCMNXXXXXXXXXXXXRVAEEFKDLPGYERHFMISGLKGSGVKDLTQYLMEQ 332
                  +L +N            ++ E ++ L   +    +S   G GV+D+  +++ +
Sbjct: 235 P----PTLLILNKKDLVKPGELAKKL-EWYEKLTDVDEVIPVSAKYGQGVEDVKDWILSK 289

Query: 333 AVGRPWDEDPFTMSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWK 382
               P       +SE   +    E+VRE++      EIPY  +  ++++K
Sbjct: 290 LPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVNYK 339


>Glyma16g24870.1 
          Length = 428

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 20/232 (8%)

Query: 157 KSLSVGIIGAPNAGKSALTNFMVGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGL 216
           +S  V ++G PN GKS L N M+G K++ V+ K  TT H ++ + +  D Q+  +DTPG+
Sbjct: 129 RSGYVALLGKPNVGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSGTDYQMILYDTPGV 188

Query: 217 MLNCGGFPYRDVKARVESAWSSVNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMGERSIPN 276
           +          +   V SA  +VN  + ++V+ D  +   + D  + + +  + ++    
Sbjct: 189 LQKEMHLLDSMMMKNVRSA--AVNA-DCVLVLVDARKTPEKIDGLLEEGIGDLKDKP--- 242

Query: 277 QKRILCMNXXXXXXXXXXXXRVAEEFKDLPGYERH------FMISGLKGSGVKDLTQYLM 330
              +L +N            +  E  K L  YE+         +S   G GV+D+  +++
Sbjct: 243 -PTLLILN-------KKDLVKPGELAKKLEWYEKFTEVDEVIPVSAKYGQGVEDVKDWIL 294

Query: 331 EQAVGRPWDEDPFTMSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWK 382
            +    P       +SE   +    E+VRE++      EIPY  +  ++++K
Sbjct: 295 SKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVNYK 346


>Glyma02g09560.1 
          Length = 62

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 36/41 (87%)

Query: 345 MSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWKELR 385
           MSEE+ K IA EVV ERLLDHVHQ+IPYD++H+LID KELR
Sbjct: 1   MSEEITKTIALEVVHERLLDHVHQKIPYDVQHRLIDRKELR 41