Miyakogusa Predicted Gene

Lj0g3v0264279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264279.1 Non Chatacterized Hit- tr|D8SRZ7|D8SRZ7_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,34.53,0.000000000005,OS03G0366900 PROTEIN,NULL; REPLICATION
PROTEIN A-RELATED,NULL; seg,NULL; no description,Nucleic
acid,CUFF.17423.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g18770.1                                                       187   5e-48
Glyma07g27560.1                                                        76   2e-14
Glyma12g20560.1                                                        75   5e-14

>Glyma08g18770.1 
          Length = 183

 Score =  187 bits (475), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 89/163 (54%), Positives = 118/163 (72%), Gaps = 8/163 (4%)

Query: 7   ISLQNTHVKLLAFDLLSLTPNPY-SSDPSSTFYRRGIPLTRAETVGTVTLRDHKPNRFLR 65
           ++L NTHVKLLAFDLLSLT +P+ SSD +++F+RRGIP++R ETVGT+TLRD K +RFLR
Sbjct: 12  VALHNTHVKLLAFDLLSLTQSPFPSSDATTSFFRRGIPISRVETVGTITLRDLKHDRFLR 71

Query: 66  FAIDDGTGCIPCILWLNQLSSPHLARRRSPQDLRLIADAAESSXXXXXXXXXXXXXXXIT 125
           FA+DDGT C+PC+LWLN  +SP +ARRR  +        A                  ++
Sbjct: 72  FAVDDGTACVPCVLWLNDANSPSVARRRRHE-------LAARFAALVKLGAVARVRGRLS 124

Query: 126 AFRGSVQMTVSDVVLERDPNAEMVHWIECVNLARNCYNVLPQP 168
            FRG++Q+TVSDV +ERDPNAE+ H ++C+ LARNCYN+LP P
Sbjct: 125 RFRGTLQVTVSDVAIERDPNAEIFHRLDCILLARNCYNILPPP 167


>Glyma07g27560.1 
          Length = 91

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 26/116 (22%)

Query: 48  ETVGTVTLRDHKPNRFLRFAIDDGTGCIPCILWLNQLSSPHLARRRSPQDLRLIADAAES 107
           E +GT+TL++ K + FLRF ++D  GC+PC+LWLN  +S  +        L  +   A  
Sbjct: 2   EIMGTITLQELKHDWFLRFVMNDDIGCVPCLLWLNDANSLSVGLTTRFASLIKLGTVA-- 59

Query: 108 SXXXXXXXXXXXXXXXITAFRGSVQMTVSDVVLERDPNAEMVHWIECVNLARNCYN 163
                                   ++TVSD+V+ERD NA++ H ++C+ LA NCYN
Sbjct: 60  ------------------------RVTVSDIVVERDLNAKIFHRLDCILLAHNCYN 91


>Glyma12g20560.1 
          Length = 109

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 8/116 (6%)

Query: 48  ETVGTVTLRDHKPNRFLRFAIDDGTGCIPCILWLNQLSSPHLARRRSPQDLRLIADAAES 107
           E VG++ L + K ++FL FA+DDGT CI  +L LN  +S  +A R          D A  
Sbjct: 2   EIVGSIMLWNLKHDQFLCFAVDDGTNCIL-LLSLNDANSSSVACRHHH-------DHAMR 53

Query: 108 SXXXXXXXXXXXXXXXITAFRGSVQMTVSDVVLERDPNAEMVHWIECVNLARNCYN 163
                           ++ FRG+VQ+T+S+VV+ER+PNAE+ H + C+ L  N YN
Sbjct: 54  FASLVKLDIVAIVKGRLSRFRGAVQVTMSNVVVERNPNAEIFHCLNCILLTHNYYN 109