Miyakogusa Predicted Gene

Lj0g3v0263999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263999.1 CUFF.17400.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g05160.2                                                       140   3e-34
Glyma14g05160.1                                                       140   3e-34
Glyma02g43750.1                                                       136   4e-33

>Glyma14g05160.2 
          Length = 107

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/115 (65%), Positives = 84/115 (73%), Gaps = 15/115 (13%)

Query: 1   MSAFKAYKACAPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60
           M+AFKAYKAC PIAWSPN+YITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 61  MLQQVL------TEALHKSIICWKQLISLCPQTEGRSPPSPPLVINHQPAAAAGA 109
           MLQQV       TE ++K+    KQ      + E      PPLVI+H+P +   A
Sbjct: 61  MLQQVKRLVVIETEEMYKA---RKQ------KEEAHRALRPPLVISHKPPSVTDA 106


>Glyma14g05160.1 
          Length = 107

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/115 (65%), Positives = 84/115 (73%), Gaps = 15/115 (13%)

Query: 1   MSAFKAYKACAPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60
           M+AFKAYKAC PIAWSPN+YITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 61  MLQQVL------TEALHKSIICWKQLISLCPQTEGRSPPSPPLVINHQPAAAAGA 109
           MLQQV       TE ++K+    KQ      + E      PPLVI+H+P +   A
Sbjct: 61  MLQQVKRLVVIETEEMYKA---RKQ------KEEAHRALRPPLVISHKPPSVTDA 106


>Glyma02g43750.1 
          Length = 107

 Score =  136 bits (343), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 73/115 (63%), Positives = 82/115 (71%), Gaps = 15/115 (13%)

Query: 1   MSAFKAYKACAPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60
           M+AFKAYKAC PIAWSPN+YITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 61  MLQQVL------TEALHKSIICWKQLISLCPQTEGRSPPSPPLVINHQPAAAAGA 109
           MLQQV       TE ++K+    KQ      + E       P VI+H+P +   A
Sbjct: 61  MLQQVKRLVVIETEEMYKA---RKQ------KEEAHRALRSPFVISHKPPSVTDA 106