Miyakogusa Predicted Gene

Lj0g3v0263429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263429.1 tr|G7JTD7|G7JTD7_MEDTR C2H2-type zinc finger
protein-like protein OS=Medicago truncatula
GN=MTR_4g02,55.1,0.000000000000001, ,CUFF.17366.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g24820.1                                                        83   8e-17
Glyma03g11960.1                                                        80   5e-16
Glyma07g16300.1                                                        74   3e-14
Glyma18g40370.1                                                        62   2e-10

>Glyma01g24820.1 
          Length = 313

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 7/99 (7%)

Query: 1   MDARCMNEVSNEDDIDVAMSLNLVVCRAQLTPVQFESIQEAEDRNCKKRKRIDASSSNDQ 60
           MD RC     N DDID  ++ N VV R   + +QFES +E +  +CKKRK  DASS+   
Sbjct: 218 MDFRCRGNKGNNDDIDGDINFNSVVYRTHPS-LQFESTKEPDHISCKKRK-TDASST--L 273

Query: 61  FFQKSRSVDDRHVHHMQPKVFEFSPINIEELDLELRLGN 99
           F  KS SVD    H +QPK+FEFSP ++EELDLELRLGN
Sbjct: 274 FSPKSSSVDR---HQVQPKMFEFSPSSMEELDLELRLGN 309


>Glyma03g11960.1 
          Length = 308

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 7/99 (7%)

Query: 1   MDARCMNEVSNEDDIDVAMSLNLVVCRAQLTPVQFESIQEAEDRNCKKRKRIDASSSNDQ 60
           MD+R  +   N DDID  MSLN VV R   + +QFES +E +  +CKKRK  DASS+   
Sbjct: 213 MDSRYRDNKGNNDDIDGDMSLNSVVYRTYPS-LQFESTKEPDHISCKKRK-TDASSTLFS 270

Query: 61  FFQKSRSVDDRHVHHMQPKVFEFSPINIEELDLELRLGN 99
              +S SVD    HH++PK+FEFSP +IEELDLELRLGN
Sbjct: 271 --SQSSSVDR---HHVKPKMFEFSPSSIEELDLELRLGN 304


>Glyma07g16300.1 
          Length = 305

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 9/98 (9%)

Query: 1   MDARCMNEVSNEDDIDVAMSLNLVVCRAQLTPVQFESIQEAEDRNCKKRKRIDASSSNDQ 60
           +D+RC +   ++D  DVA+SLNL +  A+ T VQFE+ ++  D + KKRK  DASS    
Sbjct: 212 LDSRCGSTEGDDDKTDVAVSLNLFMNLARPT-VQFETKEK--DTSFKKRKE-DASSI--P 265

Query: 61  FFQKSRSVDDRHVHHMQPKVFEFSPINIEELDLELRLG 98
           FF KS SVD  H   MQ K+FE SP +IEELDLELRLG
Sbjct: 266 FFPKSCSVDRLH---MQSKMFELSPSSIEELDLELRLG 300


>Glyma18g40370.1 
          Length = 303

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 9/98 (9%)

Query: 1   MDARCMNEVSNEDDIDVAMSLNLVVCRAQLTPVQFESIQEAEDRNCKKRKRIDASSSNDQ 60
           +D+ C +   ++   DVA+ LNL + +    PV+FE+    E     K+ + DASS    
Sbjct: 210 LDSGCRSTERDDAKTDVAVILNLFMNQPH-PPVKFET---KEKYTSFKKGKADASSI--P 263

Query: 61  FFQKSRSVDDRHVHHMQPKVFEFSPINIEELDLELRLG 98
           FF KS S D    HHMQ +++EFSP +IEELDLELRLG
Sbjct: 264 FFPKSCSADR---HHMQSQMYEFSPSSIEELDLELRLG 298