Miyakogusa Predicted Gene
- Lj0g3v0263049.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0263049.1 Non Chatacterized Hit- tr|I1KZ92|I1KZ92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24762
PE,60.92,2e-19,seg,NULL,CUFF.17328.1
(132 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g46840.1 186 7e-48
Glyma08g46840.2 130 4e-31
Glyma08g46840.3 95 2e-20
>Glyma08g46840.1
Length = 133
Score = 186 bits (471), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/120 (76%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Query: 1 MESTSSKVNVPNSRQSSKRLLFDRRYGWVIDEWKGPAEEALDGGRGMFCIFPLAKALVQM 60
MESTSSKVNVPNSRQ SK+LLFDRRYGWVIDEWK PAEEALDGGRGMFCI PLAKALV
Sbjct: 1 MESTSSKVNVPNSRQLSKQLLFDRRYGWVIDEWKDPAEEALDGGRGMFCILPLAKALVHK 60
Query: 61 ASQSINITAITARKAFENPQLSSHQMLQSALDGAVRNF-SSLKNTGCKGFTLGKNSQLDA 119
ASQSIN I+ +KA E P+L SHQMLQSALD V++F +SLKN G KGF L KNSQ A
Sbjct: 61 ASQSINCAVISVKKASEKPELFSHQMLQSALDDGVKSFMTSLKNVGSKGFILNKNSQSQA 120
>Glyma08g46840.2
Length = 124
Score = 130 bits (327), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Query: 30 IDEWKGPAEEALDGGRGMFCIFPLAKALVQMASQSINITAITARKAFENPQLSSHQMLQS 89
IDEWK PAEEALDGGRGMFCI PLAKALV ASQSIN I+ +KA E P+L SHQMLQS
Sbjct: 21 IDEWKDPAEEALDGGRGMFCILPLAKALVHKASQSINCAVISVKKASEKPELFSHQMLQS 80
Query: 90 ALDGAVRNF-SSLKNTGCKGFTLGKNSQ 116
ALD V++F +SLKN G KGF L KNSQ
Sbjct: 81 ALDDGVKSFMTSLKNVGSKGFILNKNSQ 108
>Glyma08g46840.3
Length = 87
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 47 MFCIFPLAKALVQMASQSINITAITARKAFENPQLSSHQMLQSALDGAVRNF-SSLKNTG 105
MFCI PLAKALV ASQSIN I+ +KA E P+L SHQMLQSALD V++F +SLKN G
Sbjct: 1 MFCILPLAKALVHKASQSINCAVISVKKASEKPELFSHQMLQSALDDGVKSFMTSLKNVG 60
Query: 106 CKGFTLGKNSQLDA 119
KGF L KNSQ A
Sbjct: 61 SKGFILNKNSQSQA 74