Miyakogusa Predicted Gene

Lj0g3v0262909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262909.1 tr|B9NCL2|B9NCL2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_586270 PE=4
SV=1,68.18,0.00000001,seg,NULL; Tic22,Tic22-like,CUFF.17318.1
         (344 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g24090.1                                                       555   e-158
Glyma16g29580.1                                                       491   e-139

>Glyma09g24090.1 
          Length = 565

 Score =  555 bits (1430), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 288/345 (83%), Positives = 301/345 (87%), Gaps = 9/345 (2%)

Query: 1   MALPSEPHRRRRSNNPISSFLETTASNFASLFNPQIPSSPLTLTKSQPHPPSSISLPLFF 60
           MALPSEPHRRRR N+ IS+FL++TASNFASLFNP  P S L L    PHPPSS SLPLFF
Sbjct: 1   MALPSEPHRRRRHNH-ISTFLQSTASNFASLFNPPNPPS-LAL----PHPPSSFSLPLFF 54

Query: 61  APPLSTPTVDXXXXXXXXXXXXXXXXVRVTRLSTNGKGGG-PAFVGQVFSMCDLSGTGLM 119
           APPLS+ T                  VR+ RL  NGKGGG P FVGQVFSMCDLSGTGLM
Sbjct: 55  APPLSSSTA--VDSATAEPARPAAKSVRIARLGANGKGGGGPVFVGQVFSMCDLSGTGLM 112

Query: 120 AVSTHFDIPFISKRTPEWLKKVFAAITKSERNGPVFRFFIDLGDAVSYVKKLNIPSGVVG 179
           AVSTHFDIPFISKRTPEWLKKVFAAITKSERNGPVFRFFIDLGDAVSYVKKLNIPSGVVG
Sbjct: 113 AVSTHFDIPFISKRTPEWLKKVFAAITKSERNGPVFRFFIDLGDAVSYVKKLNIPSGVVG 172

Query: 180 ACRLDLAYEHFKEKPHLFQFVPNEKQVKEANKILKTNPHNGVRRKVDGVPVFSAQNLDIA 239
           ACRLDLAYEHFKEKPHLFQFVPNEKQVK ANK+LKT   +G ++KVDGVPVFSAQNLDIA
Sbjct: 173 ACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLKTISEHGEKKKVDGVPVFSAQNLDIA 232

Query: 240 IATTDGVKWYTPYFFDKKMLDNILEEAVDQHFHTLIQTRNMHRRRDVVDDNLAAEVIEEM 299
           IATTDG+KWYTPYFFDK MLDNILEEAVDQHFHTLIQTR+MHRRRDVVDDNLAAEVIEEM
Sbjct: 233 IATTDGIKWYTPYFFDKNMLDNILEEAVDQHFHTLIQTRHMHRRRDVVDDNLAAEVIEEM 292

Query: 300 GDSLGDPPEVQELLDEMGHPSIPLSVISKAAELQFHYTVDKVLLG 344
           GDSLG+PPEVQELLDEMGHPSIPLSVISKAAELQF YTVDKV LG
Sbjct: 293 GDSLGEPPEVQELLDEMGHPSIPLSVISKAAELQFQYTVDKVFLG 337


>Glyma16g29580.1 
          Length = 528

 Score =  491 bits (1264), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/347 (77%), Positives = 292/347 (84%), Gaps = 11/347 (3%)

Query: 1   MALPSEPHRRRRSNNP-ISSFLETTASNFASLFNPQIPSSPLTLTKSQPHPPSSISLPLF 59
           MALPSEPHRRRR N+  IS+FL++TASNFASLFNP  P S LTL    PHPP+S+SLPLF
Sbjct: 1   MALPSEPHRRRRHNHNHISTFLQSTASNFASLFNPPNPPS-LTL----PHPPTSVSLPLF 55

Query: 60  FAPPLS-TPTVDXXXXXXXXXXXXXXXXVRVTRLSTNGKGGG-PAFVGQVFSMCDLSGTG 117
           FAPPLS + TVD                VR+ RL  NGKGGG P F+G+VFS+CDLSGTG
Sbjct: 56  FAPPLSGSSTVDSATSKPAHPPAKS---VRIARLGANGKGGGGPVFLGEVFSLCDLSGTG 112

Query: 118 LMAVSTHFDIPFISKRTPEWLKKVFAAITKSERNGPVFRFFIDLGDAVSYVKKLNIPSGV 177
           L+A S HF IPFIS+RTPEWLKK+FA ITKSERNGPVFRFFIDL DAVSYV+KLNIPS V
Sbjct: 113 LIAASKHFGIPFISERTPEWLKKIFAPITKSERNGPVFRFFIDLEDAVSYVEKLNIPSCV 172

Query: 178 VGACRLDLAYEHFKEKPHLFQFVPNEKQVKEANKILKTNPHNGVRRKVDGVPVFSAQNLD 237
           VGA RLDLAY+ FKEKPHLFQFVPNEKQVK ANK+LKT   +G ++KVDGVPVF AQNLD
Sbjct: 173 VGAFRLDLAYKQFKEKPHLFQFVPNEKQVKAANKLLKTISEHGDKKKVDGVPVFGAQNLD 232

Query: 238 IAIATTDGVKWYTPYFFDKKMLDNILEEAVDQHFHTLIQTRNMHRRRDVVDDNLAAEVIE 297
           IAIATTDG+KWYTPYFFDK MLDNILE+AVDQHFH LIQTR+M RRRDVVDDNLAAEVIE
Sbjct: 233 IAIATTDGIKWYTPYFFDKNMLDNILEDAVDQHFHNLIQTRHMQRRRDVVDDNLAAEVIE 292

Query: 298 EMGDSLGDPPEVQELLDEMGHPSIPLSVISKAAELQFHYTVDKVLLG 344
           EM D LG+PPEVQELLDEMGHPSIPLSVISKAA LQF YTVDKVLLG
Sbjct: 293 EMSDRLGEPPEVQELLDEMGHPSIPLSVISKAAGLQFQYTVDKVLLG 339