Miyakogusa Predicted Gene

Lj0g3v0262609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262609.1 Non Chatacterized Hit- tr|C0PH02|C0PH02_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,31.47,3e-18,seg,NULL,CUFF.17290.1
         (368 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g16100.1                                                       464   e-131
Glyma05g05760.1                                                       447   e-126
Glyma05g05760.2                                                       444   e-125
Glyma19g26990.1                                                       371   e-103

>Glyma17g16100.1 
          Length = 369

 Score =  464 bits (1194), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/336 (69%), Positives = 262/336 (77%), Gaps = 6/336 (1%)

Query: 34  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
           KSQRGHNKPKCKQCGNVARSRCPYECCKSCC+RNQNPCHIHVLKANST P+K PSSGA+P
Sbjct: 39  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCSRNQNPCHIHVLKANSTFPDKAPSSGASP 98

Query: 94  LDQQSLELPHSTNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAKLK 153
           LDQQSL+ P ST AGR ASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA AINEWRFAK+K
Sbjct: 99  LDQQSLDPPQST-AGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFAKIK 157

Query: 154 EYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWLKL 213
           EYKERN+EVENEAFDRYMQNVDLLEEVL                P + E+NE MIP LKL
Sbjct: 158 EYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLDENVPSALESNPTTMESNEAMIPGLKL 217

Query: 214 QISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEINEPM-DEADEVSKSGKGTERLSAL 272
           Q+ SNSMRS+ +R R+QQIVDEGL KL+ SAVDG+INE + DE+++ S+ GKG ERLSA+
Sbjct: 218 QLRSNSMRSDGLRMRIQQIVDEGLKKLKKSAVDGDINESIDDESNKASERGKGIERLSAI 277

Query: 273 NDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETPAI 332
           +DLM+KINKARTEEDLK CLE+K+QLF+                          D  PA 
Sbjct: 278 SDLMEKINKARTEEDLKPCLEMKTQLFNLDEGASVKDLQDNEMHENETV---VTDVVPAE 334

Query: 333 GLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
           GL+YSLPK V T EID ETLN +DKHF S +D+E+L
Sbjct: 335 GLDYSLPKFVTTTEIDLETLNTIDKHF-STQDIEQL 369


>Glyma05g05760.1 
          Length = 364

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/338 (66%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 34  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
           KSQRGHNKPKCKQCGNVARSRCPYECCKSCC+RNQNPCHIHVLKANST P+K  SSGA+P
Sbjct: 31  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCSRNQNPCHIHVLKANSTFPDKASSSGASP 90

Query: 94  LDQQSLEL--PHSTNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAK 151
           LDQQSL+   P ST+AGR ASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA +INEWRFAK
Sbjct: 91  LDQQSLDPHPPQSTSAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAASINEWRFAK 150

Query: 152 LKEYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWL 211
           +KEYKERN+EVENEAFDRYMQNVDLLEEVL                    E+NE MIP +
Sbjct: 151 IKEYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLDANVPSALESNATPMESNEAMIPGI 210

Query: 212 KLQISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEINEPMD-EADEVSKSGKGTERLS 270
           KLQ+ SNSMRS+ +R R+QQIV+EGL KL+ SAVDG+INE +D E++E SK GKG ERLS
Sbjct: 211 KLQLRSNSMRSDGLRMRIQQIVNEGLKKLEKSAVDGDINESIDGESNEASKRGKGIERLS 270

Query: 271 ALNDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETP 330
           A++DLMDKINKARTEEDLK CLE+K+QLF+                    A     D   
Sbjct: 271 AISDLMDKINKARTEEDLKPCLEMKTQLFNLDEGSSAKDLQDNEMHANETAES---DVVQ 327

Query: 331 AIGLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
             GL+YSLPK V   EID E L+ +DKHF S +D+E+L
Sbjct: 328 TEGLDYSLPKFVTITEIDLEVLHTIDKHF-STQDIEQL 364


>Glyma05g05760.2 
          Length = 363

 Score =  444 bits (1142), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/338 (66%), Positives = 256/338 (75%), Gaps = 8/338 (2%)

Query: 34  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
           KSQRGHNKPKCKQCGNVARSRCPYECCKSCC+RNQNPCHIHVLKANST P+K  SSGA+P
Sbjct: 31  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCSRNQNPCHIHVLKANSTFPDKASSSGASP 90

Query: 94  LDQQSLELPH--STNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAK 151
           LDQQSL+ PH   + AGR ASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA +INEWRFAK
Sbjct: 91  LDQQSLD-PHPPQSTAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAASINEWRFAK 149

Query: 152 LKEYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWL 211
           +KEYKERN+EVENEAFDRYMQNVDLLEEVL                    E+NE MIP +
Sbjct: 150 IKEYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLDANVPSALESNATPMESNEAMIPGI 209

Query: 212 KLQISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEINEPMD-EADEVSKSGKGTERLS 270
           KLQ+ SNSMRS+ +R R+QQIV+EGL KL+ SAVDG+INE +D E++E SK GKG ERLS
Sbjct: 210 KLQLRSNSMRSDGLRMRIQQIVNEGLKKLEKSAVDGDINESIDGESNEASKRGKGIERLS 269

Query: 271 ALNDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETP 330
           A++DLMDKINKARTEEDLK CLE+K+QLF+                    A     D   
Sbjct: 270 AISDLMDKINKARTEEDLKPCLEMKTQLFNLDEGSSAKDLQDNEMHANETAES---DVVQ 326

Query: 331 AIGLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
             GL+YSLPK V   EID E L+ +DKHF S +D+E+L
Sbjct: 327 TEGLDYSLPKFVTITEIDLEVLHTIDKHF-STQDIEQL 363


>Glyma19g26990.1 
          Length = 295

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/302 (64%), Positives = 225/302 (74%), Gaps = 18/302 (5%)

Query: 70  PCHI--HVLKANSTVPEKTPSSGAAPLDQQSLELPHSTNAGRAASLRQLSNSFAQFNNLH 127
           PC +   VLKANST P+K PSSGA+PL+QQSL+ P ST+AGR ASLRQLSNSFAQFNNLH
Sbjct: 9   PCLMVNAVLKANSTFPDKAPSSGASPLEQQSLDPPQSTSAGRFASLRQLSNSFAQFNNLH 68

Query: 128 LSLRSKKPLTRKDAEAINEWRFAKLKEYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXX 187
           LSLRSKKPLTRKDA AINEWRFAK+KEYKERN+EVENEAFDRYMQNVDLLEEVL      
Sbjct: 69  LSLRSKKPLTRKDAAAINEWRFAKIKEYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLD 128

Query: 188 XXXXXXXXXXPASTENNETMIPWLKLQISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDG 247
                     P + E+NE MIP LKLQ+ SNSMRS+ +R R+QQIVDEGL KL+ SAVDG
Sbjct: 129 ENVPSALESNPTTMESNEAMIPGLKLQLRSNSMRSDGLRMRIQQIVDEGLKKLEKSAVDG 188

Query: 248 EINEPM-DEADEVSKSGKGTERLSALNDLMDKINKARTEEDLKLCLELKSQLFDXXXXXX 306
           +INE + DE+++ S+ GKG ERLSA++DLMDKINKARTEEDLK CLE+K+QLF+      
Sbjct: 189 DINESIDDESNKASERGKGIERLSAISDLMDKINKARTEEDLKPCLEMKTQLFNLDEGAN 248

Query: 307 XXXXXXXXXXXXXKAAEPARDETPAIGLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVE 366
                               D  PA GL+YSLPK V T EID ETLN +DKHF S +D+E
Sbjct: 249 NETVVI--------------DVVPAEGLDYSLPKFVTTTEIDLETLNTIDKHF-STQDIE 293

Query: 367 EL 368
           +L
Sbjct: 294 QL 295