Miyakogusa Predicted Gene

Lj0g3v0262589.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262589.1 Non Chatacterized Hit- tr|I1IM10|I1IM10_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,63.41,2e-19,SUBFAMILY NOT NAMED,NULL;
SEC3/SYNTAXIN-RELATED,NULL,CUFF.17287.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03710.1                                                       140   3e-34
Glyma17g36540.1                                                        99   7e-22
Glyma09g18840.1                                                        97   5e-21

>Glyma04g03710.1 
          Length = 880

 Score =  140 bits (353), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 70/79 (88%), Positives = 73/79 (92%)

Query: 1  MAKSSADDAELRRACEAAIEGTKQKIVLSIRVVKTIGTWGKTSKLGRQMAKPRVLAISTK 60
          MAKSSADDAELRRACE AIEGTK K+VLSIR VKT GTWGKT+KLGRQMAKPRVLA+ TK
Sbjct: 1  MAKSSADDAELRRACEHAIEGTKHKVVLSIRTVKTHGTWGKTAKLGRQMAKPRVLALCTK 60

Query: 61 AKTQRTKAFLRVLKYSNGG 79
          AK QRTKAFLRVLKYSNGG
Sbjct: 61 AKVQRTKAFLRVLKYSNGG 79


>Glyma17g36540.1 
          Length = 896

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 12/90 (13%)

Query: 1  MAKSSADDAELRRACEAAIEGTKQKIVLSIRVVKTIGTWGK-TSKLGRQMAKPRVLAIS- 58
          MAKSSADD ELRRAC+AAIE  KQKIV+++RV K+ G  GK +SKLGR MAKPRVLA+S 
Sbjct: 1  MAKSSADDGELRRACDAAIEDPKQKIVMALRVAKSHGILGKPSSKLGR-MAKPRVLALSV 59

Query: 59 ---------TKAKTQRTKAFLRVLKYSNGG 79
                    K+K QRT AFLRVLKYS GG
Sbjct: 60 VGDDVVFPAAKSKGQRTTAFLRVLKYSTGG 89


>Glyma09g18840.1 
          Length = 896

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 12/90 (13%)

Query: 1  MAKSSADDAELRRACEAAIEGTKQKIVLSIRVVKTIGTWGK-TSKLGRQMAKPRVLAIS- 58
          MAKSSADD ELRRAC+AAIE  +QKIV+++RV K+ G +GK +SKLGR MAKPRVLA+S 
Sbjct: 1  MAKSSADDGELRRACDAAIEDPRQKIVMALRVAKSHGIFGKSSSKLGR-MAKPRVLALSI 59

Query: 59 ---------TKAKTQRTKAFLRVLKYSNGG 79
                    K+K  RT AFLRVLKYS GG
Sbjct: 60 VGDDVVFPAAKSKGLRTSAFLRVLKYSTGG 89