Miyakogusa Predicted Gene
- Lj0g3v0262469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0262469.1 Non Chatacterized Hit- tr|I3T3J1|I3T3J1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,95.73,0,RING
FINGER,NULL; seg,NULL; no description,Zinc finger, RING/FYVE/PHD-type;
zf-rbx1,Zinc finger, RIN,CUFF.17281.1
(117 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g10750.1 197 2e-51
Glyma06g45990.1 197 2e-51
Glyma13g38420.1 192 8e-50
Glyma12g32060.1 184 1e-47
Glyma12g32060.4 184 2e-47
Glyma12g10750.2 118 1e-27
Glyma12g32060.2 108 1e-24
Glyma12g32060.3 106 4e-24
Glyma01g13960.1 84 3e-17
Glyma18g19000.1 84 3e-17
Glyma20g22300.1 49 1e-06
Glyma10g28310.2 49 1e-06
Glyma10g28310.1 49 1e-06
Glyma13g34030.2 49 2e-06
Glyma13g34030.1 49 2e-06
>Glyma12g10750.1
Length = 116
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 95/114 (83%)
Query: 4 TLDSDVAMVXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 63
TLDSDV MV RFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI
Sbjct: 3 TLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 62
Query: 64 ECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
ECQANQAS TSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 63 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
>Glyma06g45990.1
Length = 116
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 95/114 (83%)
Query: 4 TLDSDVAMVXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 63
TLDSDV MV RFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI
Sbjct: 3 TLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 62
Query: 64 ECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
ECQANQAS TSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 63 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
>Glyma13g38420.1
Length = 118
Score = 192 bits (487), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/116 (81%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
Query: 4 TLDSDVAMVXXX--XXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61
TLDSDV MV RFEIKKWNAV+LWAWDIVVDNCAICRNHIMDL
Sbjct: 3 TLDSDVTMVPAGEPSTSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL 62
Query: 62 CIECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
CIECQANQAS TSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 63 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
>Glyma12g32060.1
Length = 118
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/116 (79%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Query: 4 TLDSDVAMVXXXXXXXXXXXX--XXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61
TLDSDV + RFEIKKWNAV+LWAWDIVVDNCAICRNHIMDL
Sbjct: 3 TLDSDVTVFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL 62
Query: 62 CIECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
CIECQANQAS TSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 63 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
>Glyma12g32060.4
Length = 118
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/116 (78%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Query: 4 TLDSDVAMVXXXXXXXXXXXX--XXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61
TLDSDV + RFEIKKWNAV+LWAWDIVVDNCAICRNHIMDL
Sbjct: 3 TLDSDVTVFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL 62
Query: 62 CIECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
CIECQANQAS TSEECTVAWG+CNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 63 CIECQANQASATSEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
>Glyma12g10750.2
Length = 91
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 59/78 (75%)
Query: 4 TLDSDVAMVXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 63
TLDSDV MV RFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI
Sbjct: 3 TLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 62
Query: 64 ECQANQASPTSEECTVAW 81
ECQANQAS TSEECTVAW
Sbjct: 63 ECQANQASATSEECTVAW 80
>Glyma12g32060.2
Length = 85
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/54 (94%), Positives = 52/54 (96%)
Query: 30 RFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASPTSEECTVAWGV 83
RFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQAS TSEECTVAWG
Sbjct: 31 RFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGT 84
>Glyma12g32060.3
Length = 93
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 4 TLDSDVAMVXXXXXXXXXXXX--XXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61
TLDSDV + RFEIKKWNAV+LWAWDIVVDNCAICRNHIMDL
Sbjct: 3 TLDSDVTVFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL 62
Query: 62 CIECQANQASPTSEECTVAWGVCNHAFHF 90
CIECQANQAS TSEECTVAW + +
Sbjct: 63 CIECQANQASATSEECTVAWADGSRPVKY 91
>Glyma01g13960.1
Length = 85
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 4 TLDSDVAMVXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI 63
TLD DV MV FEIKKWN V LWAWDIVVDNCAIC NHIMDLC
Sbjct: 3 TLDFDVPMVPTGEPSSNVGPSSKKPKHFEIKKWNVVTLWAWDIVVDNCAICWNHIMDLCK 62
Query: 64 ECQANQ----ASPTSEECTVAW 81
+ Q +S TSEECTVAW
Sbjct: 63 KFHFFQLKTASSATSEECTVAW 84
>Glyma18g19000.1
Length = 146
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 4 TLDSDVAM--VXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61
TLDSDV + V RF+IKKWN V+LWAW+IVVDNCAICRNHIMDL
Sbjct: 3 TLDSDVTVFPVGKASSSGGPSLSNKKLKRFKIKKWNVVSLWAWNIVVDNCAICRNHIMDL 62
Query: 62 C--IECQANQASPTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQK 114
IECQAN+AS SEECTVAW +F + R + +V E F++
Sbjct: 63 YKRIECQANEASAISEECTVAWVKTGPSFVDAAVGRIAQGTRVLAEGGYEKIFRQ 117
>Glyma20g22300.1
Length = 57
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 73 TSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 113
++C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 56
>Glyma10g28310.2
Length = 57
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 73 TSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 113
++C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 56
>Glyma10g28310.1
Length = 57
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 73 TSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 113
++C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 56
>Glyma13g34030.2
Length = 57
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 73 TSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 113
++C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVHSQTSQAHCPMCRREWQFK 56
>Glyma13g34030.1
Length = 57
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 73 TSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 113
++C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVHSQTSQAHCPMCRREWQFK 56