Miyakogusa Predicted Gene

Lj0g3v0261909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261909.1 Non Chatacterized Hit- tr|B9SDQ1|B9SDQ1_RICCO
Ubiquitin carboxyl-terminal hydrolase, putative
OS=Ric,56.43,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.17233.1
         (316 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g11330.1                                                       357   7e-99
Glyma13g16040.1                                                       353   1e-97
Glyma02g43930.1                                                       352   2e-97
Glyma14g04890.1                                                       348   3e-96
Glyma10g23680.1                                                       334   9e-92
Glyma20g17130.1                                                       212   4e-55
Glyma20g17170.1                                                        91   2e-18

>Glyma20g11330.1 
          Length = 746

 Score =  357 bits (917), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 179/304 (58%), Positives = 237/304 (77%), Gaps = 6/304 (1%)

Query: 16  ELENGDILCFQR-SAHDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
           +LE+GDI+CFQ+ S+ DS+ +   P++PS+LE++HNRQVV FRSL+RP ++ F+LE+S+ 
Sbjct: 394 QLEDGDIICFQKASSMDSEENARYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRL 453

Query: 75  NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
             YDD+V+R+A+ +GLDDPSKIRLT HNC+S+QP P PI+YRGV++L DMLV+ NQTS I
Sbjct: 454 FTYDDVVERVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDI 513

Query: 135 MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSP 194
           +YYEVLDIPLP+LQ LK L+VAF+++TK EV+ + IR+P  STV D++  LK K++LS P
Sbjct: 514 LYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVLDDLKTKVELSDP 573

Query: 195 DANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFR 252
           +A L+LL+V  HKIYK +  +EKI  I+  + TLR  EIP +EK+LG  D LI V HF +
Sbjct: 574 EAELRLLEVFYHKIYKVFPPNEKIESINDQYWTLRAEEIPEEEKNLGSHDRLIHVYHFNK 633

Query: 253 ETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDP 312
           ET     NQM+I+ FGEPF LVIHEGETL ++KV+IQ KL VP  +F KWKFAFLSL  P
Sbjct: 634 ETA---QNQMQIQNFGEPFFLVIHEGETLDEIKVRIQKKLQVPDDEFCKWKFAFLSLGRP 690

Query: 313 NYLQ 316
            YLQ
Sbjct: 691 EYLQ 694


>Glyma13g16040.1 
          Length = 367

 Score =  353 bits (907), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 177/304 (58%), Positives = 237/304 (77%), Gaps = 6/304 (1%)

Query: 16  ELENGDILCFQR-SAHDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
           +LE+GDI+CFQ+ S+ D + +   P++PS+LE++HNRQVV FRSLERP ++ F+LE+S+ 
Sbjct: 15  QLEDGDIICFQKASSMDIEENVRYPDVPSYLEYVHNRQVVHFRSLERPKEDDFFLEMSRL 74

Query: 75  NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
             YDD+V+R+A+ +GLDDPSKIRLT HNC+S+QP P PI+YRGV++L DMLV+ NQTS I
Sbjct: 75  FTYDDVVERVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDI 134

Query: 135 MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSP 194
           +YYEVLDIPLP+LQ LK L+VAF+++TK+EV+ + IR+P  S V D++  LK K++LS P
Sbjct: 135 LYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSIVGDVLDDLKTKVELSDP 194

Query: 195 DANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFR 252
           +A L+LL+V  HKIYK +  +EKI +I+  + TLR  EIP +EK+LGP D LI V HF +
Sbjct: 195 EAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFNK 254

Query: 253 ETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDP 312
           +      NQM+I+ FGEPF LVIHEGETL ++KV+IQ KL VP  +F KWKFAFLSL  P
Sbjct: 255 DAA---QNQMQIQNFGEPFFLVIHEGETLDEIKVRIQKKLQVPDDEFCKWKFAFLSLGRP 311

Query: 313 NYLQ 316
            YLQ
Sbjct: 312 EYLQ 315


>Glyma02g43930.1 
          Length = 1118

 Score =  352 bits (904), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 174/303 (57%), Positives = 234/303 (77%), Gaps = 5/303 (1%)

Query: 16   ELENGDILCFQRSAHDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKAN 75
            +LE+GDI+CFQ++    +     P++PS+LE++HNRQVV FRSLE+P ++ F LE+S+  
Sbjct: 767  QLEDGDIICFQKAPAIDNEHVRYPDVPSYLEYVHNRQVVHFRSLEKPKEDDFCLEMSRLY 826

Query: 76   GYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVIM 135
             YDD+V+++A+ +GLDDPS IRLT HNC+S+QP P PI+YRGV++L DMLV+ NQTS I+
Sbjct: 827  TYDDVVEKVAQQLGLDDPSIIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDIL 886

Query: 136  YYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSPD 195
            YYEVLDIPLP+LQ LK L+VAF+++TK+EV+ + IR+P  STV D+++ LK K++LS P+
Sbjct: 887  YYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLNDLKTKVELSDPE 946

Query: 196  ANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFRE 253
            A L+LL+V  HKIYK +  +EKI  I+  + TLR  EIP +EK+LGP D LI V HF ++
Sbjct: 947  AELRLLEVFYHKIYKVFPPNEKIESINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKD 1006

Query: 254  TGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDPN 313
            T     NQM+I+ FGEPF LVIHEGETLA++KV+IQ KL VP  +F KWKFAF SL  P 
Sbjct: 1007 TA---QNQMQIQNFGEPFFLVIHEGETLAEIKVRIQKKLQVPDDEFVKWKFAFFSLGRPE 1063

Query: 314  YLQ 316
            YLQ
Sbjct: 1064 YLQ 1066


>Glyma14g04890.1 
          Length = 1126

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 173/303 (57%), Positives = 231/303 (76%), Gaps = 5/303 (1%)

Query: 16   ELENGDILCFQRSAHDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKAN 75
            +LE+GDI+CFQ++          P++PS+LE++HNRQVV FRSLE+P ++ F LE+S+  
Sbjct: 775  QLEDGDIVCFQKAPAIDSEHVRYPDVPSYLEYVHNRQVVHFRSLEKPKEDDFCLEMSRLY 834

Query: 76   GYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVIM 135
             YDD+V+++A+ +GL+DPS IRLT HNC+S+QP P PI+YRGV +L DMLV+ NQTS I+
Sbjct: 835  TYDDVVEKVAQQLGLEDPSIIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDIL 894

Query: 136  YYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSPD 195
            YYEVLDIPLP+LQ LK L+VAF+++TK+EV+ + IR+P  STV D++  LK K++LS P+
Sbjct: 895  YYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSDPE 954

Query: 196  ANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFRE 253
            A L+LL+V  HKIYK +  +EKI  I+  + TLR  EIP +EK+LGP D LI V HF ++
Sbjct: 955  AELRLLEVFYHKIYKVFPPNEKIESINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKD 1014

Query: 254  TGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDPN 313
            T     NQM+I+ FGEPF LVIHEGETLA++KV+IQ KL VP  +F KWKFAF SL  P 
Sbjct: 1015 TA---QNQMQIQNFGEPFFLVIHEGETLAEIKVRIQKKLQVPDDEFVKWKFAFFSLGRPE 1071

Query: 314  YLQ 316
            YLQ
Sbjct: 1072 YLQ 1074


>Glyma10g23680.1 
          Length = 979

 Score =  334 bits (856), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 169/305 (55%), Positives = 232/305 (76%), Gaps = 8/305 (2%)

Query: 16  ELENGDILCFQRSA--HDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSK 73
           +LE+GDI+CFQ+S+    S      P++PSFLE++HNR VV FR+LE+P ++ F LELSK
Sbjct: 629 QLEDGDIICFQKSSPQTGSGERYRYPDVPSFLEYVHNRLVVRFRTLEKPKEDEFSLELSK 688

Query: 74  ANGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSV 133
            + YD++V+ +A+HIGL DPSKIRLTSHNC+S+QP    I++RG+++L DML++ NQTS 
Sbjct: 689 LDSYDNVVEEVAQHIGLHDPSKIRLTSHNCYSQQPKAQSIKFRGMEHLTDMLIHSNQTSD 748

Query: 134 IMYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSS 193
           I+YYEVLDIPLP+LQ LK L++ F+++TK+EV+ + IR+P HSTV D+I+ LK+K+ LS 
Sbjct: 749 ILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPRHSTVSDVINDLKSKVDLSH 808

Query: 194 PDANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFF 251
           PDA L+LL+V  HKIYK +  +EKI +I+  +  LR  EIP +EK+LG  D LI V HF 
Sbjct: 809 PDAELRLLEVFYHKIYKIFRVNEKIENINDQYCALRAEEIPEEEKNLGSHDRLIHVYHFL 868

Query: 252 RETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDD 311
           ++T     NQ +++ FG PF+LVI EGETLA+VK++IQ KL VP ++F KWKFAFLS   
Sbjct: 869 KDT---TQNQ-QVQNFGHPFLLVIREGETLAEVKLRIQKKLQVPDEEFSKWKFAFLSFGR 924

Query: 312 PNYLQ 316
           P YLQ
Sbjct: 925 PEYLQ 929


>Glyma20g17130.1 
          Length = 331

 Score =  212 bits (540), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 140/174 (80%), Gaps = 1/174 (0%)

Query: 16  ELENGDILCFQRSAH-DSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
           +LE+GDI+CFQ+S    S      P++PSFLE++HNR VV FR+LE+P ++ F LEL+K 
Sbjct: 158 QLEDGDIICFQKSVQTGSGERYRYPDVPSFLEYVHNRLVVRFRTLEKPKEDEFSLELTKL 217

Query: 75  NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
           + YD++V+ +A+HIGL DPSKIRLTSHNC+S+QP P  I+YRG+++L DML++ NQTS I
Sbjct: 218 DTYDNVVEEVAQHIGLSDPSKIRLTSHNCYSQQPKPQSIKYRGMEHLSDMLIHSNQTSDI 277

Query: 135 MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNK 188
           +YYEVLDIPLP+LQ LK L++AF++ T +EV+ + IR+P HSTV D+I+ LK+K
Sbjct: 278 LYYEVLDIPLPELQCLKTLKIAFHHDTNDEVVIHTIRLPRHSTVSDVINDLKSK 331


>Glyma20g17170.1 
          Length = 134

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 3/85 (3%)

Query: 232 IPDEKSLGPSDILIPVSHFFRETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSK 291
           + +EK+LGP D LI V HF ++T     NQ +++ FG PF+LVIHEGETL +VK++IQ K
Sbjct: 3   LEEEKNLGPHDRLIHVYHFLKDT---TQNQQQVQNFGHPFLLVIHEGETLTEVKLRIQKK 59

Query: 292 LHVPAKDFDKWKFAFLSLDDPNYLQ 316
           L VP ++F KWKFAFLS   P YLQ
Sbjct: 60  LQVPDEEFSKWKFAFLSFGRPEYLQ 84