Miyakogusa Predicted Gene

Lj0g3v0261889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261889.1 tr|G7LEE7|G7LEE7_MEDTR Ubiquitin
carboxyl-terminal hydrolase family protein OS=Medicago truncatula
G,39.68,6e-17,seg,NULL,CUFF.17229.1
         (127 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08540.1                                                       111   1e-25
Glyma08g44200.1                                                       107   4e-24
Glyma02g26890.1                                                        94   4e-20
Glyma03g36450.1                                                        81   2e-16
Glyma19g39120.1                                                        68   2e-12

>Glyma18g08540.1 
          Length = 343

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 1/124 (0%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F +WAFT LG+VLHFLK  K KDM G +C H             F LTWLEPHVQ A  M
Sbjct: 219 FVEWAFTALGRVLHFLKTKKVKDMNGDACNHLQILWEELKMFR-FDLTWLEPHVQSALGM 277

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           K+  +++ +++++ + V A   ET+ L+ K    ++ LE+AR NL KE+EG+EE DLD  
Sbjct: 278 KTCIERSVQMKRMGEDVTALEMETKRLKAKMIEAEVNLEIARRNLMKEKEGFEECDLDAE 337

Query: 122 LGYG 125
           LGYG
Sbjct: 338 LGYG 341


>Glyma08g44200.1 
          Length = 257

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F +WAFT LG+VLHFLK  K KDM G +C +             F LTWLEPHVQ A  M
Sbjct: 133 FVEWAFTALGRVLHFLKTKKVKDMDGDACNNLQIFWEELKMFR-FDLTWLEPHVQSALAM 191

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           K+  ++A +V++ ++ V A   ET+ L+ K    ++ LE+AR +  K +EG+EE DLD  
Sbjct: 192 KTCIERAVRVKRTREDVTALEMETKRLKAKMIQAEVDLEIARRDFVKAKEGFEECDLDAE 251

Query: 122 LGYG 125
           LGYG
Sbjct: 252 LGYG 255


>Glyma02g26890.1 
          Length = 350

 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 72/124 (58%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F+QWAFT+LG VLHFLK  + KD+     ++            GF L WLEP+VQ A   
Sbjct: 225 FRQWAFTSLGHVLHFLKTKRVKDINEEDIKYLHGLWKELVKSSGFDLAWLEPYVQLALGS 284

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           ++Y ++AN+++KLKDKV A   + + LR +    +   E+AR  L++   G+ E DL+  
Sbjct: 285 RAYMERANQLKKLKDKVVALEIKMKRLRGELAAAEGEFEVARRGLSEVRRGFNEMDLNAA 344

Query: 122 LGYG 125
           +GY 
Sbjct: 345 IGYA 348


>Glyma03g36450.1 
          Length = 449

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/88 (46%), Positives = 52/88 (59%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           FK WAFT+LGQVLH LK +K KDM   +C              GF L+WLEP+VQ A  M
Sbjct: 252 FKLWAFTSLGQVLHLLKTSKVKDMNEDACNRLRGLWEELVKHSGFQLSWLEPYVQSALGM 311

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLR 89
           +++ DK  +V KLKD V A   + + LR
Sbjct: 312 EAHLDKTGEVNKLKDSVVALEIKMKKLR 339


>Glyma19g39120.1 
          Length = 103

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%)

Query: 25  MTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEMKSYFDKANKVRKLKDKVKAFYRE 84
           M   +C              GF L+WLEP+VQ A +MK++ DK ++V KLKD V A   +
Sbjct: 1   MNEEACNRLQGLWEELVKHSGFQLSWLEPYVQSALDMKTHLDKTDEVNKLKDSVVALEIK 60

Query: 85  TRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTVLGYG 125
            + LR +    +   E+AR  LA+  +G+ E DL+  LGY 
Sbjct: 61  MKKLREELVAAEAEFEVARRALAEARKGFIEMDLNADLGYA 101