Miyakogusa Predicted Gene

Lj0g3v0261509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261509.1 Non Chatacterized Hit- tr|I3SGU5|I3SGU5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.75,1e-18,seg,NULL; Tocopherol_cycl,Tocopherol
cyclase,CUFF.17203.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g08750.1                                                        95   2e-20
Glyma04g08740.1                                                        94   3e-20
Glyma06g08850.1                                                        94   4e-20

>Glyma04g08750.1 
          Length = 470

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/46 (91%), Positives = 44/46 (95%)

Query: 55  YSPTPPNRDLRTPHSGYHFDGSARKFFEGWYFKVSIPERRQSFCFI 100
           YSPT PNRDLRTPHSGYHFDG+ RKFFEGWYFKVSIPERRQSFCF+
Sbjct: 49  YSPTLPNRDLRTPHSGYHFDGTTRKFFEGWYFKVSIPERRQSFCFM 94


>Glyma04g08740.1 
          Length = 203

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 44/47 (93%)

Query: 54  AYSPTPPNRDLRTPHSGYHFDGSARKFFEGWYFKVSIPERRQSFCFI 100
            YSPTPPNR LRTPHSGYHFDG+ RKFFEGWYFKVSIPER+QSFCF+
Sbjct: 57  TYSPTPPNRGLRTPHSGYHFDGTTRKFFEGWYFKVSIPERKQSFCFM 103


>Glyma06g08850.1 
          Length = 480

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 41/46 (89%), Positives = 44/46 (95%)

Query: 55  YSPTPPNRDLRTPHSGYHFDGSARKFFEGWYFKVSIPERRQSFCFI 100
           YSPTPPNR LRTPHSGYHFDG+ RKFFEGWYFK+SIPERRQSFCF+
Sbjct: 59  YSPTPPNRHLRTPHSGYHFDGTTRKFFEGWYFKLSIPERRQSFCFM 104