Miyakogusa Predicted Gene

Lj0g3v0260289.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0260289.1 Non Chatacterized Hit- tr|C5Y314|C5Y314_SORBI
Putative uncharacterized protein Sb05g000690
OS=Sorghu,51.11,5e-18,Serinc,TMS membrane protein/tumour
differentially expressed protein; UNCHARACTERIZED,NULL; SERINE
IN,CUFF.17150.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g19930.1                                                       215   7e-57
Glyma08g04410.1                                                       141   1e-34
Glyma09g32070.1                                                       138   1e-33
Glyma07g09740.1                                                       137   3e-33
Glyma05g35320.1                                                       129   7e-31
Glyma18g36750.1                                                        70   4e-13
Glyma08g46830.1                                                        70   6e-13
Glyma13g28010.1                                                        68   3e-12

>Glyma20g19930.1 
          Length = 420

 Score =  215 bits (548), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 101/113 (89%), Positives = 108/113 (95%)

Query: 1   MAAFSTGIDSKCFQFSKNKVEHEDDIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKW 60
           MAAFSTGIDSKCFQFSKNKVEHEDDIPY+YGFFHMVFSLGAMYFAMLFISWDLN+SARKW
Sbjct: 308 MAAFSTGIDSKCFQFSKNKVEHEDDIPYSYGFFHMVFSLGAMYFAMLFISWDLNSSARKW 367

Query: 61  SIDVGWLSTWVKVINEWFAATIYIWILISPVVRQNKVIGDDRTVQEMTDSVMA 113
           SIDVGW+STWVKVINEWFAATIYIW+LISPVVR N+V+ +D TVQE  DSVMA
Sbjct: 368 SIDVGWISTWVKVINEWFAATIYIWMLISPVVRHNRVMDNDGTVQETADSVMA 420


>Glyma08g04410.1 
          Length = 393

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 79/101 (78%), Gaps = 1/101 (0%)

Query: 1   MAAFSTGIDSKCFQFSKN-KVEHEDDIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARK 59
           +A FSTGIDSKCFQF K+     EDD+PY YGFFH VF+ GAMYFAML I W+ ++S RK
Sbjct: 292 IATFSTGIDSKCFQFRKDDTAPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRK 351

Query: 60  WSIDVGWLSTWVKVINEWFAATIYIWILISPVVRQNKVIGD 100
           W+IDVGW STWVK++NEW A  +Y+W+LI+P++ +N+  G 
Sbjct: 352 WTIDVGWTSTWVKIVNEWLAVCVYLWMLIAPIIWKNRQTGS 392


>Glyma09g32070.1 
          Length = 402

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 77/96 (80%)

Query: 1   MAAFSTGIDSKCFQFSKNKVEHEDDIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKW 60
           +A FSTGIDSKCFQF K+    EDD+PY YGFFH VF+ GAMYFAML I W+ ++S RKW
Sbjct: 302 VATFSTGIDSKCFQFRKSDPPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRKW 361

Query: 61  SIDVGWLSTWVKVINEWFAATIYIWILISPVVRQNK 96
           +IDVGW S WV+++NEW A  +Y+W+L++P++ +++
Sbjct: 362 TIDVGWTSAWVRIVNEWLAVCVYLWMLVAPIIWKSR 397


>Glyma07g09740.1 
          Length = 401

 Score =  137 bits (344), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 77/96 (80%)

Query: 1   MAAFSTGIDSKCFQFSKNKVEHEDDIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKW 60
           +A FSTGIDS+CFQF K+    EDD+PY YGFFH VF+ GAMYFAML I W+ ++S RKW
Sbjct: 301 VATFSTGIDSECFQFRKSDSPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRKW 360

Query: 61  SIDVGWLSTWVKVINEWFAATIYIWILISPVVRQNK 96
           +IDVGW S WV+++NEW A  +Y+W+L++P++ +++
Sbjct: 361 TIDVGWTSAWVRIVNEWLAVCVYLWMLVAPIIWKSR 396


>Glyma05g35320.1 
          Length = 383

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 9/100 (9%)

Query: 1   MAAFSTGIDSKCFQFSKNKVEHEDDIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKW 60
           +A FSTGIDSKCFQ         DD+PY YGFFH VF+ GAMYFAML I W+ ++S RKW
Sbjct: 292 IATFSTGIDSKCFQ---------DDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRKW 342

Query: 61  SIDVGWLSTWVKVINEWFAATIYIWILISPVVRQNKVIGD 100
           +IDVGW STWV+++NEW A  +Y+W+LI+P++ +++  G 
Sbjct: 343 TIDVGWTSTWVRIVNEWLAVCVYLWMLIAPIIWKSRHTGS 382


>Glyma18g36750.1 
          Length = 410

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)

Query: 25  DIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKWSIDVGWLSTWVKVINEWFAATIYI 84
            + Y+Y FFH++FSL +MY AML   W  +       +DVGW S WV++I  W  A +Y+
Sbjct: 337 PVTYSYAFFHLIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITSWATALLYL 396

Query: 85  WILISPVVRQNK 96
           W LI+P++   +
Sbjct: 397 WSLIAPIMFPER 408


>Glyma08g46830.1 
          Length = 410

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 44/72 (61%)

Query: 25  DIPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKWSIDVGWLSTWVKVINEWFAATIYI 84
            + Y+Y FFH++FSL +MY AML   W  +       +DVGW S WV++I  W  A +Y+
Sbjct: 337 PVTYSYAFFHLIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITSWATALLYL 396

Query: 85  WILISPVVRQNK 96
           W L++P++   +
Sbjct: 397 WSLVAPIMFPER 408


>Glyma13g28010.1 
          Length = 367

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 26  IPYNYGFFHMVFSLGAMYFAMLFISWDLNNSARKWSIDVGWLSTWVKVINEWFAATIYIW 85
           + Y+Y FFH++F+L +MY AML   W   + +    IDVGW S WV++  EW  A +YIW
Sbjct: 295 VSYSYSFFHLIFALASMYSAMLLSGWTSTSESSDL-IDVGWTSVWVRIGTEWVTAGLYIW 353

Query: 86  ILISPVV 92
            L++P++
Sbjct: 354 SLLAPLL 360