Miyakogusa Predicted Gene

Lj0g3v0260059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0260059.1 tr|A9RVJ3|A9RVJ3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_119940,36.7,0.00000000000001,UNCHARACTERIZED,NULL,
CUFF.17140.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g29850.2                                                       209   4e-55
Glyma03g29850.3                                                       209   5e-55
Glyma03g29860.1                                                       209   5e-55
Glyma19g32740.1                                                       207   2e-54
Glyma19g32750.3                                                       206   6e-54
Glyma19g32750.1                                                       201   1e-52
Glyma03g29850.1                                                       179   6e-46
Glyma19g32750.2                                                       112   1e-25
Glyma17g25670.1                                                        62   2e-10
Glyma09g28330.1                                                        60   7e-10

>Glyma03g29850.2 
          Length = 519

 Score =  209 bits (533), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 95/116 (81%), Positives = 104/116 (89%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT++DPDQFTNFVIP+W   +ST   K NPF LPD Y+A
Sbjct: 404 MVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWFGAESTGATKGNPFMLPDAYMA 463

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQGD 116
           SQH+NQKNLGEIR+LL+EA LEESRKRE SSALHVYFKDWLYASGNIRQLYCLQGD
Sbjct: 464 SQHKNQKNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 519


>Glyma03g29850.3 
          Length = 566

 Score =  209 bits (533), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 95/116 (81%), Positives = 104/116 (89%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT++DPDQFTNFVIP+W   +ST   K NPF LPD Y+A
Sbjct: 451 MVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWFGAESTGATKGNPFMLPDAYMA 510

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQGD 116
           SQH+NQKNLGEIR+LL+EA LEESRKRE SSALHVYFKDWLYASGNIRQLYCLQGD
Sbjct: 511 SQHKNQKNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 566


>Glyma03g29860.1 
          Length = 565

 Score =  209 bits (532), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 96/116 (82%), Positives = 105/116 (90%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQ ESATQ+DP+QFTNFVIP W+ G+ST   K+NPFTLPD Y+A
Sbjct: 450 MVDPHDSLSHPAGVSDVQTESATQVDPEQFTNFVIPSWLGGESTGFKKDNPFTLPDAYMA 509

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQGD 116
           SQH+N KNL EIRKLL+EASLEESRKRE SSALHVYFKDWLYASGNIRQLYCLQGD
Sbjct: 510 SQHKNHKNLEEIRKLLREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 565


>Glyma19g32740.1 
          Length = 566

 Score =  207 bits (527), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 94/116 (81%), Positives = 104/116 (89%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT++DPDQFT+FVIP+W  G+ST   K NPFTLPD Y+ 
Sbjct: 451 MVDPHDSLSHPAGVSDVQAESATRVDPDQFTDFVIPNWFGGESTGATKGNPFTLPDAYMV 510

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQGD 116
           SQH+NQKNLGEIR LL+EA LE+SRKRE SSALHVYFKDWLYASGNIRQLYCLQGD
Sbjct: 511 SQHKNQKNLGEIRHLLREAPLEDSRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 566


>Glyma19g32750.3 
          Length = 356

 Score =  206 bits (523), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/116 (81%), Positives = 105/116 (90%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT +DPDQFTNFVIP W+  +ST + K+NPFTLPD Y+A
Sbjct: 241 MVDPHDSLSHPAGVSDVQAESATLVDPDQFTNFVIPSWLVEESTGSTKDNPFTLPDAYMA 300

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQGD 116
           SQH+N KNL EIR+LL+EASLEESRKRE SSALHVYFKDWLYASGNIRQLYCLQGD
Sbjct: 301 SQHKNHKNLEEIRQLLREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 356


>Glyma19g32750.1 
          Length = 695

 Score =  201 bits (511), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 93/114 (81%), Positives = 103/114 (90%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT +DPDQFTNFVIP W+  +ST + K+NPFTLPD Y+A
Sbjct: 501 MVDPHDSLSHPAGVSDVQAESATLVDPDQFTNFVIPSWLVEESTGSTKDNPFTLPDAYMA 560

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQ 114
           SQH+N KNL EIR+LL+EASLEESRKRE SSALHVYFKDWLYASGNIRQLYCLQ
Sbjct: 561 SQHKNHKNLEEIRQLLREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQ 614


>Glyma03g29850.1 
          Length = 608

 Score =  179 bits (454), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 83/111 (74%), Positives = 94/111 (84%), Gaps = 2/111 (1%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT++DPDQFTNFVIP+W   +ST   K NPF LPD Y+A
Sbjct: 451 MVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWFGAESTGATKGNPFMLPDAYMA 510

Query: 61  SQHRNQKNLGEIRKLLQEASLEESRKREFSSALHVYFKDWLY--ASGNIRQ 109
           SQH+NQKNLGEIR+LL+EA LEESRKRE SSALHVYFKDWLY    G+ R+
Sbjct: 511 SQHKNQKNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYVFCCGSFRK 561


>Glyma19g32750.2 
          Length = 356

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 2/89 (2%)

Query: 1   MLDPHDSLSHSAGVSDVQAESATQLDPDQFTNFVIPDWIAGDSTVTAKNNPFTLPDVYVA 60
           M+DPHDSLSH AGVSDVQAESAT +DPDQFTNFVIP W+  +ST + K+NPFTLPD Y+A
Sbjct: 241 MVDPHDSLSHPAGVSDVQAESATLVDPDQFTNFVIPSWLVEESTGSTKDNPFTLPDAYMA 300

Query: 61  SQHRN--QKNLGEIRKLLQEASLEESRKR 87
           SQH+N  QK  G+   L +     +S+ R
Sbjct: 301 SQHKNVSQKFRGDKATLTRSIFRRKSQTR 329


>Glyma17g25670.1 
          Length = 33

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 31/32 (96%)

Query: 71  EIRKLLQEASLEESRKREFSSALHVYFKDWLY 102
           EIR+LL+EA LEESRKREFSSALHVYFKDWLY
Sbjct: 1   EIRQLLREAPLEESRKREFSSALHVYFKDWLY 32


>Glyma09g28330.1 
          Length = 33

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 30/32 (93%)

Query: 71  EIRKLLQEASLEESRKREFSSALHVYFKDWLY 102
           EIR+LL+EA LEESRKRE SSALHVYFKDWLY
Sbjct: 1   EIRQLLREAPLEESRKRELSSALHVYFKDWLY 32