Miyakogusa Predicted Gene

Lj0g3v0259769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259769.1 Non Chatacterized Hit- tr|I1JQE0|I1JQE0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,38.51,0.000000000000001,TRAF domain-like,TRAF-like; ZF_TRAF,Zinc
finger, TRAF-type; TNF RECEPTOR ASSOCIATED FACTOR,NULL;
seg,CUFF.17115.1
         (408 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g39140.1                                                       612   e-175
Glyma02g26780.1                                                       576   e-164
Glyma03g36480.1                                                       200   2e-51

>Glyma19g39140.1 
          Length = 520

 Score =  612 bits (1577), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 289/409 (70%), Positives = 347/409 (84%), Gaps = 10/409 (2%)

Query: 1   MSVLSSMELPTTNVDLSPEKIKDEKEGGPMIHCDLCDTEVIHKMAQMFVPGLASACVDNT 60
           MS+LSSM++PT +VDL PEK++DEK+GGP++HCDLCDTEV+HK+AQMF+PGLASACVDNT
Sbjct: 1   MSILSSMDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNT 60

Query: 61  TGDPFKTPGSVVNDLRKDMIDYLTQRSESFVAESVILEGTGPDDEVSDHPFDIVSYFVDD 120
           +GD FKTPGSV  DLRK+MI+Y+TQRSESFVAESVILEG GPD E SDHPFDI+S FVDD
Sbjct: 61  SGDLFKTPGSVAVDLRKEMIEYVTQRSESFVAESVILEG-GPDGEESDHPFDIISDFVDD 119

Query: 121 FVDSKRNLFSKVSGWLLSDKREDKIDDFVQEIEMNGFWSLDRRETIAETLLKNVDFKNLF 180
           FV SKRNLFS+VSGWLLS+KRED+IDDFVQE+EMNGFW+LDRRETIAETLLKNVDF+N +
Sbjct: 120 FVSSKRNLFSRVSGWLLSEKREDRIDDFVQEMEMNGFWTLDRRETIAETLLKNVDFENSY 179

Query: 181 HCSMKFNSAEDLAKHTEKCNFKPMICQNEGCNNRFSTRHLKEHDSTCPFKIIPCEQKCTD 240
           HC+M FNSAE+L  H + CNF+ MIC+NEGCN+RF   HLK HDSTCPFKIIPCEQKC+D
Sbjct: 180 HCNMSFNSAEELVNHVDNCNFRTMICENEGCNSRFCAAHLKNHDSTCPFKIIPCEQKCSD 239

Query: 241 SLMRRQMDRHCITECPMKLVNCPFYSVGCRSAISQCMIEKHCADDLHSHLLHILKGIHRE 300
            +MRR+MDRHCIT CPMKLVNCPFY VGCRSA++QCMIEKH  DD+HSHL H+LKGI+++
Sbjct: 240 CIMRREMDRHCITICPMKLVNCPFYVVGCRSAVAQCMIEKHRLDDVHSHLWHLLKGIYKQ 299

Query: 301 ASGEDLKRRVEQIVQAXXXXXLAEAKEVRSLKNIVKALEAKLGPLEVSA-EKTSAETASM 359
           A G+DLKRRVEQIVQA     LAEA++VRSL  IVK +EAKLGP +VS  EK +AE  + 
Sbjct: 300 AYGDDLKRRVEQIVQASSSSRLAEARDVRSLNFIVKDIEAKLGPFKVSVLEKNNAEIVTK 359

Query: 360 NEDSEDRSTGTKGGEQSLQA---LNSPDKVEVSAILNKNSAENAVNNED 405
           N++ E   T     E+S++A   +NSPDK E+S + N N+A++   NED
Sbjct: 360 NDEGEAGDT-----EKSMKASDMVNSPDKAELSDMKNMNNAKSTTKNED 403


>Glyma02g26780.1 
          Length = 401

 Score =  576 bits (1485), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 286/409 (69%), Positives = 328/409 (80%), Gaps = 18/409 (4%)

Query: 1   MSVLSSMELPTTNVDLSPEKIKDEKEGGPMIHCDLCDTEVIHKMAQMFVPGLASACVDNT 60
           MSVL SMELPTT+VDL P+KI+ EK  GP+ HCD CDTEV+HK+AQMF+PGLA A     
Sbjct: 1   MSVLPSMELPTTDVDLEPKKIEPEKNEGPLFHCDFCDTEVVHKLAQMFLPGLACA----- 55

Query: 61  TGDPFKTPGSVVNDLRKDMIDYLTQRSESFVAESVILEGTGPDDEVSDHPFDIVSYFVDD 120
                     +  DLRK+MI+++TQ+SESFVAESVILEG GPD    +HPFDI+ YFVD+
Sbjct: 56  ----------LAVDLRKEMIEFVTQKSESFVAESVILEG-GPDGGALEHPFDIICYFVDE 104

Query: 121 FVDSKRNLFSKVSGWLLSDKREDKIDDFVQEIEMNGFWSLDRRETIAETLLKNVDFKNLF 180
           FV SKRNL S+VSGWLLSDKREDKIDDFVQE+EMNGFW LDRRET+A+TL+KNVD K+ F
Sbjct: 105 FVSSKRNLLSQVSGWLLSDKREDKIDDFVQEMEMNGFWPLDRRETLAKTLIKNVDVKSSF 164

Query: 181 HCSMKFNSAEDLAKHTE-KCNFKPMICQNEGCNNRFSTRHLKEHDSTCPFKIIPCEQKCT 239
           HCSM F SA DLA H +  CNF+P+IC+NEGC+ RFS  HLKEHDS C FKI+PCEQKCT
Sbjct: 165 HCSMSFKSARDLANHADDGCNFRPVICRNEGCDARFSAGHLKEHDSACDFKIVPCEQKCT 224

Query: 240 DSLMRRQMDRHCITECPMKLVNCPFYSVGCRSAISQCMIEKHCADDLHSHLLHILKGIHR 299
           DS++RR+MDRHCIT CPMKLVNCPFY+VGCRSAI+Q MI KHC+DD+ SHLL +LKGIH+
Sbjct: 225 DSILRREMDRHCITVCPMKLVNCPFYAVGCRSAIAQSMIRKHCSDDIESHLLLMLKGIHQ 284

Query: 300 EASGEDLKRRVEQIVQAXXXXXLAEAKEVRSLKNIVKALEAKLGPLEVSA-EKTSAETAS 358
           EASGEDLKRRVEQI+QA     LAEA++VRS KNIVK LE KLGPLEV A EKTSAET +
Sbjct: 285 EASGEDLKRRVEQILQASSRSKLAEARDVRSYKNIVKDLEVKLGPLEVIAKEKTSAETVA 344

Query: 359 MNEDSEDRSTGTKGGEQSLQALNSPDKVEVSAILNKNSAENAVNNEDSK 407
            NEDSED  T TK  EQ  Q LNS DK EVSAIL K  A NAVN  DS+
Sbjct: 345 ENEDSEDNRTKTKDKEQHTQTLNSLDKAEVSAILEKTCAGNAVNKVDSE 393


>Glyma03g36480.1 
          Length = 614

 Score =  200 bits (509), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 89/116 (76%), Positives = 107/116 (92%), Gaps = 1/116 (0%)

Query: 7   MELPTTNVDLSPEKIKDEKEGGPMIHCDLCDTEVIHKMAQMFVPGLASACVDNTTGDPFK 66
           M++PT +VDL PEK++DEK+GGP++HCDLCDTEV+HK+AQMF+PGLASACVDNT+GD FK
Sbjct: 1   MDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFK 60

Query: 67  TPGSVVNDLRKDMIDYLTQRSESFVAESVILEGTGPDDEVSDHPFDIVSYFVDDFV 122
           TPGSV  DLRK+MI+Y+TQRSESFVAESVILEG+ PD EVSDHPFDI+S  VDDF+
Sbjct: 61  TPGSVAVDLRKEMIEYVTQRSESFVAESVILEGS-PDGEVSDHPFDIISNLVDDFI 115



 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 23/174 (13%)

Query: 244 RRQMDRHCITECPMKLVNCP--FYSVGCRSAI---SQCMIEKHCADDLHSHLLHILKGIH 298
           RR  + H  T CP+ L+  P  F S+  R+ +   +QC   + C  +     ++   G+ 
Sbjct: 337 RRDSNSHA-TFCPI-LICLPNTFPSIATRTFLLEKAQC--SERCYPNQEFEGMNFYPGVD 392

Query: 299 REASGEDLKRRVEQIVQAXXXXXLAEAKEVRSLKNIVKALEAKLGPLEVSA-EKTSAETA 357
                      +   +QA     LAEA++VRSL  IVK +EAKLGP +VSA EK + ET 
Sbjct: 393 W----------LNSCLQASSSSRLAEARDVRSLNFIVKDIEAKLGPFKVSAVEKNNGETV 442

Query: 358 SMNEDSEDRSTGTKGGEQSLQA---LNSPDKVEVSAILNKNSAENAVNNEDSKT 408
           + N   E   T   G E+S++A   +NSPDK E+S ++N N+AEN   NED ++
Sbjct: 443 TKNGQGEGGETDMNGREKSMKASDMVNSPDKAELSGMVNMNNAENTTKNEDRES 496