Miyakogusa Predicted Gene
- Lj0g3v0259369.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259369.1 Non Chatacterized Hit- tr|K4B077|K4B077_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,27.27,0.000000000000006,seg,NULL; coiled-coil,NULL,CUFF.17084.1
(321 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g18090.1 452 e-127
Glyma04g36880.1 442 e-124
Glyma06g18090.3 345 5e-95
Glyma06g18090.2 216 2e-56
>Glyma06g18090.1
Length = 557
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/324 (70%), Positives = 261/324 (80%), Gaps = 13/324 (4%)
Query: 3 KLRAGYAQKKMPLPDMDNGLHKAMRKELRHMESEQAVVKSRPSSSSTGDCMLSDNADVIK 62
KLR+ YA KK+ L D D G HKA +KELRHME+EQAVVK R S+ S DC+LS+N+D I+
Sbjct: 242 KLRSVYAHKKVALTDTDKGSHKAKQKELRHMETEQAVVKPRTSTLSAVDCLLSNNSDAIQ 301
Query: 63 GFKAISSIRRSYETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINSIQKPA 122
A+SS+RRSYETELE+SEKRKQ+LLAE+VFEEQRGRELSKIVNELVP+ + N IQ P+
Sbjct: 302 ---AVSSMRRSYETELEKSEKRKQELLAEMVFEEQRGRELSKIVNELVPSKEDNPIQNPS 358
Query: 123 RARKRSTDRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERSETSSSIGGLIKPETSN 182
RARKRS DRSRMSMRLTEEAEKYIEDFISNVEDTDISS+DGERS+ SSSIGGLIKPET N
Sbjct: 359 RARKRSNDRSRMSMRLTEEAEKYIEDFISNVEDTDISSVDGERSDASSSIGGLIKPETFN 418
Query: 183 SPPIPRSIPALMDGITLPWLQWETCNDASPMTSMNNT--LITSKTASSTQETTKLQDQRX 240
SPP+PRS+P L DG+TLPWLQWET NDASPMTS N IT KT E K+QDQ
Sbjct: 419 SPPVPRSLPVLTDGVTLPWLQWETNNDASPMTSQNKARMTITPKT-----ENIKVQDQGN 473
Query: 241 XXXXXXXXXXPDCLQEYIGKDVFNKV---YGYKDQSFSAKSKELRYDIDDYLKVKTNEDF 297
PD LQEY+GKDV++K+ YGY DQSFSAKSK LRYD+DDYLKVK+NED
Sbjct: 474 NSISSRGSWSPDYLQEYVGKDVYSKLGEGYGYPDQSFSAKSKGLRYDMDDYLKVKSNEDL 533
Query: 298 LVERWKQRQRINSGSLLLCHPRLF 321
L+E WKQR+RINSGSLLLC RLF
Sbjct: 534 LIESWKQRRRINSGSLLLCSLRLF 557
>Glyma04g36880.1
Length = 553
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/326 (69%), Positives = 259/326 (79%), Gaps = 13/326 (3%)
Query: 1 MEKLRAGYAQKKMPLPDMDNGLHKAMRKELRHMESEQAVVKSRPSSSSTGDCMLSDNADV 60
+EKLR+ YAQKK+ L D D G HKA +KEL HME+EQAVVK R S+ ST DC+L +N+DV
Sbjct: 236 IEKLRSVYAQKKVALTDTDKGSHKAKQKELTHMETEQAVVKPRTSTLSTVDCLLLNNSDV 295
Query: 61 IKGFKAISSIRRSYETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINSIQK 120
I+ +SSIRRSYETELE+SEKRKQDLLAE+VFEEQRGRELSKIVNEL+PA + N IQ
Sbjct: 296 IQ---TVSSIRRSYETELEKSEKRKQDLLAEMVFEEQRGRELSKIVNELIPAKEDNLIQN 352
Query: 121 PARARKRSTDRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERSETSSSIGGLIKPET 180
P+RARKRS DRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERS+ SSSIGGLIKPET
Sbjct: 353 PSRARKRSKDRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERSDASSSIGGLIKPET 412
Query: 181 SNSPPIPRSIPALMDGITLPWLQWETCNDASPMTSMNNT--LITSKTASSTQETTKLQDQ 238
NS P+PRS+P L DG+TLPWLQWET NDASPMT++N T IT KT E K+QDQ
Sbjct: 413 FNSLPVPRSLPVLTDGVTLPWLQWETNNDASPMTNLNKTHMTITPKT-----ENIKVQDQ 467
Query: 239 RXXXXXXXXXXXPDCLQEYIGKDVFNKV---YGYKDQSFSAKSKELRYDIDDYLKVKTNE 295
PD LQEY+GKDV++K+ GY D S SAKSK LRYD+DDYLKVK+NE
Sbjct: 468 GDNSISSRGSWSPDYLQEYVGKDVYSKLGEGCGYPDHSLSAKSKGLRYDMDDYLKVKSNE 527
Query: 296 DFLVERWKQRQRINSGSLLLCHPRLF 321
+ L+E WKQRQRI SG+LL C RLF
Sbjct: 528 NLLIESWKQRQRIKSGTLLFCSLRLF 553
>Glyma06g18090.3
Length = 473
Score = 345 bits (884), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/235 (74%), Positives = 197/235 (83%), Gaps = 5/235 (2%)
Query: 3 KLRAGYAQKKMPLPDMDNGLHKAMRKELRHMESEQAVVKSRPSSSSTGDCMLSDNADVIK 62
KLR+ YA KK+ L D D G HKA +KELRHME+EQAVVK R S+ S DC+LS+N+D I+
Sbjct: 242 KLRSVYAHKKVALTDTDKGSHKAKQKELRHMETEQAVVKPRTSTLSAVDCLLSNNSDAIQ 301
Query: 63 GFKAISSIRRSYETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINSIQKPA 122
A+SS+RRSYETELE+SEKRKQ+LLAE+VFEEQRGRELSKIVNELVP+ + N IQ P+
Sbjct: 302 ---AVSSMRRSYETELEKSEKRKQELLAEMVFEEQRGRELSKIVNELVPSKEDNPIQNPS 358
Query: 123 RARKRSTDRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERSETSSSIGGLIKPETSN 182
RARKRS DRSRMSMRLTEEAEKYIEDFISNVEDTDISS+DGERS+ SSSIGGLIKPET N
Sbjct: 359 RARKRSNDRSRMSMRLTEEAEKYIEDFISNVEDTDISSVDGERSDASSSIGGLIKPETFN 418
Query: 183 SPPIPRSIPALMDGITLPWLQWETCNDASPMTSMNNT--LITSKTASSTQETTKL 235
SPP+PRS+P L DG+TLPWLQWET NDASPMTS N IT KT SSTQ T L
Sbjct: 419 SPPVPRSLPVLTDGVTLPWLQWETNNDASPMTSQNKARMTITPKTVSSTQVITVL 473
>Glyma06g18090.2
Length = 482
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/150 (74%), Positives = 128/150 (85%), Gaps = 3/150 (2%)
Query: 3 KLRAGYAQKKMPLPDMDNGLHKAMRKELRHMESEQAVVKSRPSSSSTGDCMLSDNADVIK 62
KLR+ YA KK+ L D D G HKA +KELRHME+EQAVVK R S+ S DC+LS+N+D I+
Sbjct: 242 KLRSVYAHKKVALTDTDKGSHKAKQKELRHMETEQAVVKPRTSTLSAVDCLLSNNSDAIQ 301
Query: 63 GFKAISSIRRSYETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINSIQKPA 122
A+SS+RRSYETELE+SEKRKQ+LLAE+VFEEQRGRELSKIVNELVP+ + N IQ P+
Sbjct: 302 ---AVSSMRRSYETELEKSEKRKQELLAEMVFEEQRGRELSKIVNELVPSKEDNPIQNPS 358
Query: 123 RARKRSTDRSRMSMRLTEEAEKYIEDFISN 152
RARKRS DRSRMSMRLTEEAEKYIEDFISN
Sbjct: 359 RARKRSNDRSRMSMRLTEEAEKYIEDFISN 388
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 71/96 (73%), Gaps = 3/96 (3%)
Query: 229 TQETTKLQDQRXXXXXXXXXXXPDCLQEYIGKDVFNKV---YGYKDQSFSAKSKELRYDI 285
+ E K+QDQ PD LQEY+GKDV++K+ YGY DQSFSAKSK LRYD+
Sbjct: 387 SNENIKVQDQGNNSISSRGSWSPDYLQEYVGKDVYSKLGEGYGYPDQSFSAKSKGLRYDM 446
Query: 286 DDYLKVKTNEDFLVERWKQRQRINSGSLLLCHPRLF 321
DDYLKVK+NED L+E WKQR+RINSGSLLLC RLF
Sbjct: 447 DDYLKVKSNEDLLIESWKQRRRINSGSLLLCSLRLF 482