Miyakogusa Predicted Gene

Lj0g3v0259149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259149.1 Non Chatacterized Hit- tr|H9G413|H9G413_ANOCA
Uncharacterized protein (Fragment) OS=Anolis
carolinen,31.86,4e-19,SUBFAMILY NOT NAMED,NULL; SLD5 PROTEIN,GINS
complex, subunit Sld5; Sld5,GINS complex,CUFF.17063.1
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20740.1                                                       352   2e-97
Glyma07g01340.1                                                       190   9e-49

>Glyma08g20740.1 
          Length = 226

 Score =  352 bits (902), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 173/227 (76%), Positives = 200/227 (88%), Gaps = 1/227 (0%)

Query: 1   MDSNSVEGGPTVLTDDYDALISTTDFELLKRAWRSEKAAPEILRFESDLINRVREQIQLM 60
           M S+S   G + + DDY+ LI+TTD ELLKRAWR+EKAAPEILR+ES L++RV + IQLM
Sbjct: 1   MASSSAAEGVS-MDDDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLM 59

Query: 61  EDTVEEKGAAGADPHSLSLYQMDIDRTLFLLRSYLRIRIQKIEKYMFHIQKTDELWNRLS 120
           E+ VEEK + G DP S+SLYQMD+DRTLFLLRSYLRIRIQKIEKY+FHIQKT+EL NRLS
Sbjct: 60  EEIVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLS 119

Query: 121 TEEKNFTRRCTDDLKQHLEESVLSKLPENYQSVQKQSVISEEDDMVPEPQQDTFVLCRSK 180
             EK+F + C +DL+QHL+ESVLSKLP++Y+SV +QS +SEEDDMVPEPQ DTFVLCRSK
Sbjct: 120 KYEKDFAKMCENDLEQHLDESVLSKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSK 179

Query: 181 EYLTGIQLEDGPVDDRSKLFEMEAGVLYFICYKSIKALVESGKIDLL 227
           EYLTGIQLEDGPVDDRSKLFEME GVL+FICYKSIKALVESGKIDLL
Sbjct: 180 EYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL 226


>Glyma07g01340.1 
          Length = 128

 Score =  190 bits (483), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 90/128 (70%), Positives = 112/128 (87%), Gaps = 1/128 (0%)

Query: 1   MDSNSVEGGPTVLTDDYDALISTTDFELLKRAWRSEKAAPEILRFESDLINRVREQIQLM 60
           M SNS   G + + DDY+ALI+TTD ELLKRAWR+EKAAPEILR+ESDL++RV++ IQ +
Sbjct: 1   MASNSAAEGVS-MGDDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFL 59

Query: 61  EDTVEEKGAAGADPHSLSLYQMDIDRTLFLLRSYLRIRIQKIEKYMFHIQKTDELWNRLS 120
           E+TVEEK + G +P S+SLYQMD+DRTLFLLRSYLRIRIQKIEK++FHIQKT+ELWNRLS
Sbjct: 60  EETVEEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLS 119

Query: 121 TEEKNFTR 128
            +EK+F +
Sbjct: 120 KDEKDFAK 127