Miyakogusa Predicted Gene

Lj0g3v0259029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259029.1 tr|A9TL62|A9TL62_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_170683,33.33,0.0000000000001, ,CUFF.17052.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g32580.1                                                       266   7e-72
Glyma09g27590.1                                                       265   2e-71

>Glyma16g32580.1 
          Length = 944

 Score =  266 bits (680), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 127/172 (73%), Positives = 148/172 (86%), Gaps = 7/172 (4%)

Query: 1   MLLQDQWPNVTGFINSYCLWRGEETVHVKQGQPDPSSTLVSKLHWTYMDLPYMLGYYAVG 60
           +LLQDQWPN+TGF+N+YCLWRGEET  + + QP+PS+TLV+KL WTYMDLPY+LGYYAV 
Sbjct: 610 LLLQDQWPNITGFVNNYCLWRGEETHQLTETQPNPSTTLVAKLLWTYMDLPYILGYYAVA 669

Query: 61  KTVTFCALSTSSDANGIINRTDLLEMNLATPSDRLKAMVPCFRIGLLLHVLSKRCLSI-- 118
            TVTFCA+S S +  GIINRTDLLE+NL TP++RLKA+VPCFRIGLLL +LSKRC SI  
Sbjct: 670 NTVTFCAMSRSQE--GIINRTDLLELNLTTPTERLKALVPCFRIGLLLPLLSKRCSSIIS 727

Query: 119 ---GNCYSDFQRVYLGHGVVTEMTPNTCTRVFSEKRKWAAVKEVYEILDHRI 167
              G  YSDF+RV  G+GVVTE+TPNTCTR+FSEKRKW AVKEVYEILDHRI
Sbjct: 728 NSKGFAYSDFERVCYGNGVVTEVTPNTCTRMFSEKRKWMAVKEVYEILDHRI 779


>Glyma09g27590.1 
          Length = 919

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 127/170 (74%), Positives = 147/170 (86%), Gaps = 7/170 (4%)

Query: 3   LQDQWPNVTGFINSYCLWRGEETVHVKQGQPDPSSTLVSKLHWTYMDLPYMLGYYAVGKT 62
           LQDQWPNVTGF+N+YCLWRGEET  +K  QP+PS+TLV+KL WTYMD+PY+LGYYAV  T
Sbjct: 588 LQDQWPNVTGFVNNYCLWRGEETHQLKDSQPNPSTTLVAKLLWTYMDIPYILGYYAVANT 647

Query: 63  VTFCALSTSSDANGIINRTDLLEMNLATPSDRLKAMVPCFRIGLLLHVLSKRCLS-IGNC 121
           VTFCA+S S D  GIINRTDLL++NL+TP++RLK +VPCFRI LLL +LSKRC+S I NC
Sbjct: 648 VTFCAMSRSQD--GIINRTDLLDLNLSTPTERLKVLVPCFRIALLLPLLSKRCMSNISNC 705

Query: 122 ----YSDFQRVYLGHGVVTEMTPNTCTRVFSEKRKWAAVKEVYEILDHRI 167
               YSDF+RV  G+GVVTE+TPNTCTRVFSEKRKW AVKEVYEILDHRI
Sbjct: 706 KGFTYSDFERVCYGNGVVTEVTPNTCTRVFSEKRKWMAVKEVYEILDHRI 755